RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 NHSQ6T4R5 1651 aa24.53■■□□□ 1.52
FANCA-212ENST00000563513 TEFQ10587 303 aa24.53■■□□□ 1.52
FANCA-212ENST00000563513 TMOD3Q9NYL9 352 aa24.53■■□□□ 1.52
FANCA-212ENST00000563513 TAF7Q15545 349 aaPredicted RBP24.52■■□□□ 1.52
FANCA-212ENST00000563513 SIPA1L3O60292 1781 aaPredicted RBP24.52■■□□□ 1.52
FANCA-212ENST00000563513 WDR63Q8IWG1 891 aa24.5■■□□□ 1.51
FANCA-212ENST00000563513 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
FANCA-212ENST00000563513 ZNF853P0CG23 659 aa24.49■■□□□ 1.51
FANCA-212ENST00000563513 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
FANCA-212ENST00000563513 SLC39A6Q13433 755 aa24.48■■□□□ 1.51
FANCA-212ENST00000563513 SPINK5Q9NQ38 1064 aaPredicted RBP24.48■■□□□ 1.51
FANCA-212ENST00000563513 ASAP1Q9ULH1 1129 aa24.48■■□□□ 1.51
FANCA-212ENST00000563513 BTBD11A6QL63 1104 aa24.47■■□□□ 1.51
FANCA-212ENST00000563513 CHL1O00533 1208 aa24.47■■□□□ 1.51
FANCA-212ENST00000563513 KCNQ3O43525 872 aa24.47■■□□□ 1.51
FANCA-212ENST00000563513 CFAP44Q96MT7 982 aa24.47■■□□□ 1.51
FANCA-212ENST00000563513 IL16Q14005 1332 aa24.46■■□□□ 1.51
FANCA-212ENST00000563513 BTAF1O14981 1849 aa24.46■■□□□ 1.51
FANCA-212ENST00000563513 CALD1Q05682 793 aaKnown RBP24.45■■□□□ 1.5
FANCA-212ENST00000563513 IFT57Q9NWB7 429 aa24.45■■□□□ 1.5
FANCA-212ENST00000563513 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
FANCA-212ENST00000563513 ZNF790Q6PG37 636 aa24.44■■□□□ 1.5
FANCA-212ENST00000563513 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
FANCA-212ENST00000563513 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
FANCA-212ENST00000563513 TNS1Q9HBL0 1735 aaKnown RBP24.43■■□□□ 1.5
FANCA-212ENST00000563513 APBA3O96018 575 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 GNAI1P63096 354 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 UPF1Q92900 1129 aaKnown RBP eCLIP24.42■■□□□ 1.5
FANCA-212ENST00000563513 CDCA7LQ96GN5 454 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 MBIPQ9NS73 344 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 TSPYL4Q9UJ04 414 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 PAPPAQ13219 1627 aa24.42■■□□□ 1.5
FANCA-212ENST00000563513 GOLGA2Q08379 1002 aa24.41■■□□□ 1.5
FANCA-212ENST00000563513 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
FANCA-212ENST00000563513 PLSCR1O15162 318 aa24.4■■□□□ 1.5
FANCA-212ENST00000563513 SLFN5Q08AF3 891 aa24.4■■□□□ 1.5
FANCA-212ENST00000563513 KDM3BQ7LBC6 1761 aa24.39■■□□□ 1.5
FANCA-212ENST00000563513 CCDC125Q86Z20 511 aa24.39■■□□□ 1.49
FANCA-212ENST00000563513 SMARCC1Q92922 1105 aaPredicted RBP24.39■■□□□ 1.49
FANCA-212ENST00000563513 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
FANCA-212ENST00000563513 SLC4A9Q96Q91 983 aa24.39■■□□□ 1.49
FANCA-212ENST00000563513 PALLDQ8WX93 1383 aa24.39■■□□□ 1.49
FANCA-212ENST00000563513 EIF4A1P60842 406 aaKnown RBP24.38■■□□□ 1.49
FANCA-212ENST00000563513 TRMT2AQ8IZ69 625 aaKnown RBP24.38■■□□□ 1.49
FANCA-212ENST00000563513 PROM2Q8N271 834 aa24.38■■□□□ 1.49
FANCA-212ENST00000563513 ZNF496Q96IT1 587 aaPredicted RBP24.38■■□□□ 1.49
FANCA-212ENST00000563513 KCPQ6ZWJ8 1503 aa24.38■■□□□ 1.49
FANCA-212ENST00000563513 PTCD1O75127 700 aaKnown RBP24.36■■□□□ 1.49
FANCA-212ENST00000563513 TTC5Q8N0Z6 440 aa24.36■■□□□ 1.49
FANCA-212ENST00000563513 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
FANCA-212ENST00000563513 UBR2Q8IWV8 1755 aa24.36■■□□□ 1.49
FANCA-212ENST00000563513 E9PSI1 815 aa24.35■■□□□ 1.49
FANCA-212ENST00000563513 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
FANCA-212ENST00000563513 CAMKK2Q96RR4 588 aa24.35■■□□□ 1.49
FANCA-212ENST00000563513 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
FANCA-212ENST00000563513 LOC102724428A0A0B4J2F2 783 aa24.34■■□□□ 1.49
FANCA-212ENST00000563513 SIK1P57059 783 aa24.34■■□□□ 1.49
FANCA-212ENST00000563513 EN1Q05925 392 aaPredicted RBP24.34■■□□□ 1.49
FANCA-212ENST00000563513 KRT24Q2M2I5 525 aa24.34■■□□□ 1.49
FANCA-212ENST00000563513 RBM42Q9BTD8 480 aaKnown RBP24.34■■□□□ 1.49
FANCA-212ENST00000563513 LY75O60449 1722 aa24.34■■□□□ 1.49
FANCA-212ENST00000563513 SF3B2Q13435 895 aaKnown RBP24.33■■□□□ 1.49
FANCA-212ENST00000563513 FMNL2Q96PY5 1086 aa24.33■■□□□ 1.49
FANCA-212ENST00000563513 KCNQ4P56696 695 aa24.32■■□□□ 1.48
FANCA-212ENST00000563513 EZH2Q15910 746 aaKnown RBP24.32■■□□□ 1.48
FANCA-212ENST00000563513 TXNRD1Q16881 649 aa24.32■■□□□ 1.48
FANCA-212ENST00000563513 DUSP27Q5VZP5 1158 aa24.32■■□□□ 1.48
FANCA-212ENST00000563513 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
FANCA-212ENST00000563513 LRRC4BQ9NT99 713 aa24.32■■□□□ 1.48
FANCA-212ENST00000563513 PRAMEF22A3QJZ6 481 aa24.31■■□□□ 1.48
FANCA-212ENST00000563513 BAG6P46379 1132 aa24.31■■□□□ 1.48
FANCA-212ENST00000563513 ITPK1Q13572 414 aa24.31■■□□□ 1.48
FANCA-212ENST00000563513 VSIG10Q8N0Z9 540 aa24.31■■□□□ 1.48
FANCA-212ENST00000563513 C8orf58Q8NAV2 365 aa24.31■■□□□ 1.48
FANCA-212ENST00000563513 GIGYF1O75420 1035 aaPredicted RBP24.3■■□□□ 1.48
FANCA-212ENST00000563513 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
FANCA-212ENST00000563513 TSPYL6Q8N831 410 aa24.29■■□□□ 1.48
FANCA-212ENST00000563513 CCNL1Q9UK58 526 aaPredicted RBP24.29■■□□□ 1.48
FANCA-212ENST00000563513 SNRPA1P09661 255 aaKnown RBP24.28■■□□□ 1.48
FANCA-212ENST00000563513 EXOSC9Q06265 439 aaKnown RBP24.28■■□□□ 1.48
FANCA-212ENST00000563513 DNAJC10Q8IXB1 793 aa24.28■■□□□ 1.48
FANCA-212ENST00000563513 RGPD3A6NKT7 1758 aaPredicted RBP24.28■■□□□ 1.48
FANCA-212ENST00000563513 RGPD4Q7Z3J3 1758 aa24.28■■□□□ 1.48
FANCA-212ENST00000563513 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
FANCA-212ENST00000563513 USP16Q9Y5T5 823 aa24.27■■□□□ 1.48
FANCA-212ENST00000563513 ZNF831Q5JPB2 1677 aa24.27■■□□□ 1.48
FANCA-212ENST00000563513 TJP1Q07157 1748 aa24.25■■□□□ 1.47
FANCA-212ENST00000563513 ELL2O00472 640 aaPredicted RBP24.25■■□□□ 1.47
FANCA-212ENST00000563513 LINC00116Q8NCU8 138 aa24.25■■□□□ 1.47
FANCA-212ENST00000563513 CICQ96RK0 1608 aaPredicted RBP24.24■■□□□ 1.47
FANCA-212ENST00000563513 CYP19A1P11511 503 aaPredicted RBP24.23■■□□□ 1.47
FANCA-212ENST00000563513 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
FANCA-212ENST00000563513 C5P01031 1676 aa24.23■■□□□ 1.47
FANCA-212ENST00000563513 VAMP4O75379 141 aa24.22■■□□□ 1.47
FANCA-212ENST00000563513 HOXB7P09629 217 aa24.22■■□□□ 1.47
FANCA-212ENST00000563513 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
FANCA-212ENST00000563513 TAF1LQ8IZX4 1826 aa24.2■■□□□ 1.46
FANCA-212ENST00000563513 RREB1Q92766 1687 aa24.2■■□□□ 1.46
FANCA-212ENST00000563513 COL5A3P25940 1745 aaPredicted RBP24.19■■□□□ 1.46
FANCA-212ENST00000563513 INTS5Q6P9B9 1019 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms