RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 NISCHQ9Y2I1 1504 aa44.52■■■■■ 4.72
FANCA-212ENST00000563513 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
FANCA-212ENST00000563513 ABCC9O60706 1549 aa37.93■■■■□ 3.66
FANCA-212ENST00000563513 ZCCHC6Q5VYS8 1495 aaKnown RBP37.19■■■■□ 3.54
FANCA-212ENST00000563513 DCAF8L2P0C7V8 631 aa36.99■■■■□ 3.51
FANCA-212ENST00000563513 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
FANCA-212ENST00000563513 NACADO15069 1562 aa36.79■■■■□ 3.48
FANCA-212ENST00000563513 MYO15BQ96JP2 1530 aa36.77■■■■□ 3.48
FANCA-212ENST00000563513 RB1CC1Q8TDY2 1594 aa36.66■■■■□ 3.46
FANCA-212ENST00000563513 SCRIBQ14160 1630 aa35.89■■■■□ 3.34
FANCA-212ENST00000563513 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.33
FANCA-212ENST00000563513 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
FANCA-212ENST00000563513 PABPN1Q86U42 306 aaKnown RBP eCLIP35.61■■■■□ 3.292e-8■□□□□ 10
FANCA-212ENST00000563513 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
FANCA-212ENST00000563513 CECR2Q9BXF3 1484 aa34.67■■■■□ 3.14
FANCA-212ENST00000563513 EIF4G1Q04637 1599 aaKnown RBP34.6■■■■□ 3.13
FANCA-212ENST00000563513 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
FANCA-212ENST00000563513 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
FANCA-212ENST00000563513 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
FANCA-212ENST00000563513 MROH2BQ7Z745 1585 aa34.35■■■■□ 3.09
FANCA-212ENST00000563513 CC2D2AQ9P2K1 1620 aa34.32■■■■□ 3.08
FANCA-212ENST00000563513 RSF1Q96T23 1441 aaPredicted RBP34.18■■■■□ 3.06
FANCA-212ENST00000563513 ATAD2BQ9ULI0 1458 aa34.1■■■■□ 3.05
FANCA-212ENST00000563513 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
FANCA-212ENST00000563513 SMARCA2P51531 1590 aa34.01■■■■□ 3.03
FANCA-212ENST00000563513 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
FANCA-212ENST00000563513 WIZO95785 1651 aa33.98■■■■□ 3.03
FANCA-212ENST00000563513 HMGXB3Q12766 1538 aa33.82■■■■□ 3
FANCA-212ENST00000563513 BAZ1BQ9UIG0 1483 aaKnown RBP33.8■■■■□ 3
FANCA-212ENST00000563513 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
FANCA-212ENST00000563513 TOP2AP11388 1531 aaKnown RBP33.61■■■□□ 2.97
FANCA-212ENST00000563513 CCDC88BA6NC98 1476 aa33.29■■■□□ 2.92
FANCA-212ENST00000563513 CADPSQ9ULU8 1353 aa33.04■■■□□ 2.88
FANCA-212ENST00000563513 NESP48681 1621 aa33.03■■■□□ 2.88
FANCA-212ENST00000563513 CFTRP13569 1480 aa32.96■■■□□ 2.87
FANCA-212ENST00000563513 LAMC3Q9Y6N6 1575 aa32.94■■■□□ 2.86
FANCA-212ENST00000563513 PDS5BQ9NTI5 1447 aa32.71■■■□□ 2.83
FANCA-212ENST00000563513 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
FANCA-212ENST00000563513 FANCD2Q9BXW9 1451 aa32.63■■■□□ 2.81
FANCA-212ENST00000563513 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
FANCA-212ENST00000563513 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
FANCA-212ENST00000563513 CEP164Q9UPV0 1460 aa32.49■■■□□ 2.79
FANCA-212ENST00000563513 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
FANCA-212ENST00000563513 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
FANCA-212ENST00000563513 URB2Q14146 1524 aaKnown RBP32.3■■■□□ 2.76
FANCA-212ENST00000563513 WDR62O43379 1518 aa32.23■■■□□ 2.75
FANCA-212ENST00000563513 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
FANCA-212ENST00000563513 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
FANCA-212ENST00000563513 CUX1P39880 1505 aa32.17■■■□□ 2.74
FANCA-212ENST00000563513 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
FANCA-212ENST00000563513 WRNQ14191 1432 aaPredicted RBP eCLIP32.15■■■□□ 2.74
FANCA-212ENST00000563513 SYNJ1O43426 1573 aa32.05■■■□□ 2.72
FANCA-212ENST00000563513 CUX2O14529 1486 aa32.04■■■□□ 2.72
FANCA-212ENST00000563513 TOP2BQ02880 1626 aa32■■■□□ 2.71
FANCA-212ENST00000563513 BIVM-ERCC5R4GMW8 1640 aa31.99■■■□□ 2.71
FANCA-212ENST00000563513 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
FANCA-212ENST00000563513 FGD5Q6ZNL6 1462 aa31.95■■■□□ 2.7
FANCA-212ENST00000563513 CHIC1Q5VXU3 224 aa31.86■■■□□ 2.69
FANCA-212ENST00000563513 RAD54L2Q9Y4B4 1467 aa31.84■■■□□ 2.69
FANCA-212ENST00000563513 SOGA1O94964 1423 aa31.84■■■□□ 2.69
FANCA-212ENST00000563513 IFT140Q96RY7 1462 aa31.81■■■□□ 2.68
FANCA-212ENST00000563513 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
FANCA-212ENST00000563513 TARBP1Q13395 1621 aaKnown RBP31.79■■■□□ 2.68
FANCA-212ENST00000563513 ZNF608Q9ULD9 1512 aaPredicted RBP31.68■■■□□ 2.66
FANCA-212ENST00000563513 ABCA10Q8WWZ4 1543 aa31.66■■■□□ 2.66
FANCA-212ENST00000563513 WDR97A6NE52 1622 aa31.63■■■□□ 2.65
FANCA-212ENST00000563513 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
FANCA-212ENST00000563513 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.655e-10■■■□□ 17.8
FANCA-212ENST00000563513 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
FANCA-212ENST00000563513 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
FANCA-212ENST00000563513 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
FANCA-212ENST00000563513 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
FANCA-212ENST00000563513 RUSC2Q8N2Y8 1516 aa31.41■■■□□ 2.62
FANCA-212ENST00000563513 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
FANCA-212ENST00000563513 IGF1RP08069 1367 aa31.31■■■□□ 2.6
FANCA-212ENST00000563513 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
FANCA-212ENST00000563513 ERICH3Q5RHP9 1530 aa31.27■■■□□ 2.6
FANCA-212ENST00000563513 SNAPC4Q5SXM2 1469 aa31.26■■■□□ 2.59
FANCA-212ENST00000563513 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
FANCA-212ENST00000563513 EEA1Q15075 1411 aa31.17■■■□□ 2.58
FANCA-212ENST00000563513 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
FANCA-212ENST00000563513 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.58
FANCA-212ENST00000563513 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
FANCA-212ENST00000563513 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
FANCA-212ENST00000563513 CARMIL1Q5VZK9 1371 aa31.1■■■□□ 2.57
FANCA-212ENST00000563513 SYNJ2O15056 1496 aa31.09■■■□□ 2.57
FANCA-212ENST00000563513 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
FANCA-212ENST00000563513 FBLN2P98095 1184 aa31.05■■■□□ 2.56
FANCA-212ENST00000563513 CUL7Q14999 1698 aa31.05■■■□□ 2.56
FANCA-212ENST00000563513 PRXQ9BXM0 1461 aa31.01■■■□□ 2.56
FANCA-212ENST00000563513 CHD1O14646 1710 aa30.99■■■□□ 2.55
FANCA-212ENST00000563513 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
FANCA-212ENST00000563513 RAPGEF2Q9Y4G8 1499 aa30.94■■■□□ 2.54
FANCA-212ENST00000563513 OSCARQ8IYS5 282 aa30.89■■■□□ 2.54
FANCA-212ENST00000563513 NUP160Q12769 1436 aa30.84■■■□□ 2.53
FANCA-212ENST00000563513 KIF21BO75037 1637 aa30.81■■■□□ 2.52
FANCA-212ENST00000563513 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
FANCA-212ENST00000563513 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
FANCA-212ENST00000563513 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
FANCA-212ENST00000563513 GOLGA3Q08378 1498 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms