RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
USP8-212ENST00000560730 C5P01031 1676 aa16.13■□□□□ 0.17
USP8-212ENST00000560730 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
USP8-212ENST00000560730 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
USP8-212ENST00000560730 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 SIK1P57059 783 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 IL17REQ8NFR9 667 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 PLEKHF1Q96S99 279 aa16.11■□□□□ 0.17
USP8-212ENST00000560730 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
USP8-212ENST00000560730 ITPK1Q13572 414 aa16.1■□□□□ 0.17
USP8-212ENST00000560730 MRC1P22897 1456 aa16.09■□□□□ 0.17
USP8-212ENST00000560730 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
USP8-212ENST00000560730 QSER1Q2KHR3 1735 aa16.08■□□□□ 0.17
USP8-212ENST00000560730 LRP5O75197 1615 aa16.08■□□□□ 0.17
USP8-212ENST00000560730 ATP6V1AP38606 617 aa16.08■□□□□ 0.16
USP8-212ENST00000560730 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
USP8-212ENST00000560730 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
USP8-212ENST00000560730 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
USP8-212ENST00000560730 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
USP8-212ENST00000560730 SIPA1L3O60292 1781 aaPredicted RBP16.07■□□□□ 0.16
USP8-212ENST00000560730 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
USP8-212ENST00000560730 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
USP8-212ENST00000560730 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 AMIGO3Q86WK7 504 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
USP8-212ENST00000560730 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
USP8-212ENST00000560730 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
USP8-212ENST00000560730 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
USP8-212ENST00000560730 MCM10Q7L590 875 aa16.05■□□□□ 0.16
USP8-212ENST00000560730 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
USP8-212ENST00000560730 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
USP8-212ENST00000560730 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
USP8-212ENST00000560730 COL5A3P25940 1745 aaPredicted RBP16.04■□□□□ 0.16
USP8-212ENST00000560730 TEFQ10587 303 aa16.03■□□□□ 0.16
USP8-212ENST00000560730 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
USP8-212ENST00000560730 SPON1Q9HCB6 807 aa16.03■□□□□ 0.16
USP8-212ENST00000560730 TJP1Q07157 1748 aa16.03■□□□□ 0.16
USP8-212ENST00000560730 NEFMP07197 916 aa16.02■□□□□ 0.16
USP8-212ENST00000560730 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP8-212ENST00000560730 NFE2L2Q16236 605 aa16.02■□□□□ 0.16
USP8-212ENST00000560730 CCDC146Q8IYE0 955 aa16.02■□□□□ 0.16
USP8-212ENST00000560730 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
USP8-212ENST00000560730 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.16
USP8-212ENST00000560730 UBR2Q8IWV8 1755 aa16.02■□□□□ 0.16
USP8-212ENST00000560730 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.15
USP8-212ENST00000560730 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.15
USP8-212ENST00000560730 AK7Q96M32 723 aa16.02■□□□□ 0.15
USP8-212ENST00000560730 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
USP8-212ENST00000560730 ANP32CO43423 234 aa16.01■□□□□ 0.15
USP8-212ENST00000560730 KCNQ3O43525 872 aa16.01■□□□□ 0.15
USP8-212ENST00000560730 PTGER2P43116 358 aa16.01■□□□□ 0.15
USP8-212ENST00000560730 GNPATO15228 680 aa16■□□□□ 0.15
USP8-212ENST00000560730 PHF14O94880 888 aa16■□□□□ 0.15
USP8-212ENST00000560730 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
USP8-212ENST00000560730 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
USP8-212ENST00000560730 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
USP8-212ENST00000560730 MTFR1LQ9H019 292 aa16■□□□□ 0.15
USP8-212ENST00000560730 CICQ96RK0 1608 aaPredicted RBP15.99■□□□□ 0.15
USP8-212ENST00000560730 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
USP8-212ENST00000560730 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
USP8-212ENST00000560730 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
USP8-212ENST00000560730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
USP8-212ENST00000560730 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 TMPOP42166 694 aaKnown RBP15.98■□□□□ 0.15
USP8-212ENST00000560730 CRKLP46109 303 aaKnown RBP15.98■□□□□ 0.15
USP8-212ENST00000560730 RIPK4P57078 832 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
USP8-212ENST00000560730 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 SLC16A10Q8TF71 515 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 RUNDC1Q96C34 613 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
USP8-212ENST00000560730 COL24A1Q17RW2 1714 aa15.98■□□□□ 0.15
USP8-212ENST00000560730 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
USP8-212ENST00000560730 SSFA2P28290 1259 aa15.96■□□□□ 0.15
USP8-212ENST00000560730 NEUROD2Q15784 382 aa15.96■□□□□ 0.15
USP8-212ENST00000560730 MSL1Q68DK7 614 aa15.96■□□□□ 0.15
USP8-212ENST00000560730 FLAD1Q8NFF5 587 aa15.96■□□□□ 0.15
USP8-212ENST00000560730 MIS18AQ9NYP9 233 aa15.96■□□□□ 0.15
USP8-212ENST00000560730 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
USP8-212ENST00000560730 CYP19A1P11511 503 aaPredicted RBP15.95■□□□□ 0.14
USP8-212ENST00000560730 TAF7Q15545 349 aaPredicted RBP15.95■□□□□ 0.14
USP8-212ENST00000560730 INTS5Q6P9B9 1019 aaKnown RBP15.95■□□□□ 0.14
USP8-212ENST00000560730 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
USP8-212ENST00000560730 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
USP8-212ENST00000560730 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
USP8-212ENST00000560730 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
USP8-212ENST00000560730 RTCBQ9Y3I0 505 aaKnown RBP15.94■□□□□ 0.14
USP8-212ENST00000560730 PNISRQ8TF01 805 aaKnown RBP15.94■□□□□ 0.14
USP8-212ENST00000560730 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
USP8-212ENST00000560730 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
USP8-212ENST00000560730 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
USP8-212ENST00000560730 CCDC87Q9NVE4 849 aa15.93■□□□□ 0.14
USP8-212ENST00000560730 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms