RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
ZEB1-216ENST00000559496 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
ZEB1-216ENST00000559496 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
ZEB1-216ENST00000559496 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
ZEB1-216ENST00000559496 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
ZEB1-216ENST00000559496 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 ESPNB1AK53 854 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 ZEB1P37275 1124 aaPredicted RBP10.31□□□□□ -0.76
ZEB1-216ENST00000559496 NDUFB9Q9Y6M9 179 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 PTPN23Q9H3S7 1636 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.31□□□□□ -0.76
ZEB1-216ENST00000559496 ABCC10Q5T3U5 1492 aa10.31□□□□□ -0.76
ZEB1-216ENST00000559496 FBXO45P0C2W1 286 aa10.3□□□□□ -0.76
ZEB1-216ENST00000559496 CBLBQ13191 982 aa10.3□□□□□ -0.76
ZEB1-216ENST00000559496 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
ZEB1-216ENST00000559496 ITGAEP38570 1179 aa10.29□□□□□ -0.76
ZEB1-216ENST00000559496 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
ZEB1-216ENST00000559496 CYB5RLQ6IPT4 315 aa10.29□□□□□ -0.76
ZEB1-216ENST00000559496 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
ZEB1-216ENST00000559496 TCOF1Q13428 1488 aaKnown RBP10.29□□□□□ -0.76
ZEB1-216ENST00000559496 WDR7Q9Y4E6 1490 aa10.29□□□□□ -0.76
ZEB1-216ENST00000559496 ACIN1Q9UKV3 1341 aaKnown RBP10.29□□□□□ -0.76
ZEB1-216ENST00000559496 ERVH48-1M5A8F1 160 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 MAN1A2O60476 641 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 VEGFBP49765 207 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 NR1H3Q13133 447 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 IRF7Q92985 503 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 TRIM52Q96A61 297 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 CDC42BPAQ5VT25 1732 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 ASXL2Q76L83 1435 aa10.28□□□□□ -0.76
ZEB1-216ENST00000559496 RAB15P59190 212 aa10.27□□□□□ -0.76
ZEB1-216ENST00000559496 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.76
ZEB1-216ENST00000559496 TMPRSS4Q9NRS4 437 aa10.27□□□□□ -0.76
ZEB1-216ENST00000559496 CFDP1Q9UEE9 299 aaPredicted RBP10.27□□□□□ -0.76
ZEB1-216ENST00000559496 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.76
ZEB1-216ENST00000559496 ZNF330Q9Y3S2 320 aaPredicted RBP10.27□□□□□ -0.76
ZEB1-216ENST00000559496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
ZEB1-216ENST00000559496 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
ZEB1-216ENST00000559496 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
ZEB1-216ENST00000559496 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
ZEB1-216ENST00000559496 SPINT1O43278 529 aa10.26□□□□□ -0.77
ZEB1-216ENST00000559496 GIGYF1O75420 1035 aaPredicted RBP10.26□□□□□ -0.77
ZEB1-216ENST00000559496 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
ZEB1-216ENST00000559496 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
ZEB1-216ENST00000559496 PRM3Q9NNZ6 103 aa10.26□□□□□ -0.77
ZEB1-216ENST00000559496 CAMSAP2Q08AD1 1489 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 GPR37L1O60883 481 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 VSIG8P0DPA2 414 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 GMPRP36959 345 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 MYO5CQ9NQX4 1742 aa10.25□□□□□ -0.77
ZEB1-216ENST00000559496 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
ZEB1-216ENST00000559496 LILRA1O75019 489 aa10.24□□□□□ -0.77
ZEB1-216ENST00000559496 ZNF777Q9ULD5 760 aaPredicted RBP10.24□□□□□ -0.77
ZEB1-216ENST00000559496 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
ZEB1-216ENST00000559496 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
ZEB1-216ENST00000559496 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
ZEB1-216ENST00000559496 CDC42BPBQ9Y5S2 1711 aa10.23□□□□□ -0.77
ZEB1-216ENST00000559496 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
ZEB1-216ENST00000559496 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
ZEB1-216ENST00000559496 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
ZEB1-216ENST00000559496 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
ZEB1-216ENST00000559496 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
ZEB1-216ENST00000559496 DNMT1P26358 1616 aaKnown RBP10.21□□□□□ -0.77
ZEB1-216ENST00000559496 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.77
ZEB1-216ENST00000559496 PTPRKQ15262 1439 aa10.21□□□□□ -0.77
ZEB1-216ENST00000559496 RELBQ01201 579 aa10.21□□□□□ -0.78
ZEB1-216ENST00000559496 PLCH2O75038 1416 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 DAPK1P53355 1430 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 PPFIA3O75145 1194 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 ADH1AP07327 375 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
ZEB1-216ENST00000559496 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 ABCC5O15440 1437 aa10.2□□□□□ -0.78
ZEB1-216ENST00000559496 ARAP3Q8WWN8 1544 aa10.19□□□□□ -0.78
ZEB1-216ENST00000559496 FIGNL2A6NMB9 653 aa10.19□□□□□ -0.78
ZEB1-216ENST00000559496 CYLDQ9NQC7 956 aa10.19□□□□□ -0.78
ZEB1-216ENST00000559496 PTGIRP43119 386 aa10.18□□□□□ -0.78
ZEB1-216ENST00000559496 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
ZEB1-216ENST00000559496 KDF1Q8NAX2 398 aaPredicted RBP10.18□□□□□ -0.78
ZEB1-216ENST00000559496 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
ZEB1-216ENST00000559496 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
ZEB1-216ENST00000559496 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
ZEB1-216ENST00000559496 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
ZEB1-216ENST00000559496 INSM2Q96T92 566 aaPredicted RBP10.17□□□□□ -0.78
ZEB1-216ENST00000559496 CHIC2Q9UKJ5 165 aa10.17□□□□□ -0.78
ZEB1-216ENST00000559496 HFM1A2PYH4 1435 aa10.17□□□□□ -0.78
ZEB1-216ENST00000559496 ARHGEF5Q12774 1597 aa10.17□□□□□ -0.78
ZEB1-216ENST00000559496 CROCC2H7BZ55 1655 aa10.17□□□□□ -0.78
ZEB1-216ENST00000559496 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 RAB3GAP2Q9H2M9 1393 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 PTSQ03393 145 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
ZEB1-216ENST00000559496 MBD5Q9P267 1494 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 KIAA1107Q9UPP5 1409 aa10.16□□□□□ -0.78
ZEB1-216ENST00000559496 ROCK1Q13464 1354 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms