RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
ZEB1-211ENST00000558440 GGT6Q6P531 493 aa9.75□□□□□ -0.85
ZEB1-211ENST00000558440 BPHLQ86WA6 291 aaPredicted RBP9.75□□□□□ -0.85
ZEB1-211ENST00000558440 INSM1Q01101 510 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-211ENST00000558440 AGERQ15109 404 aa9.74□□□□□ -0.85
ZEB1-211ENST00000558440 CFDP1Q9UEE9 299 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-211ENST00000558440 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
ZEB1-211ENST00000558440 CCNB3Q8WWL7 1395 aa9.74□□□□□ -0.85
ZEB1-211ENST00000558440 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
ZEB1-211ENST00000558440 NNTQ13423 1086 aa9.73□□□□□ -0.85
ZEB1-211ENST00000558440 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
ZEB1-211ENST00000558440 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
ZEB1-211ENST00000558440 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
ZEB1-211ENST00000558440 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 ADH1CP00326 375 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 SH3BP5LQ7L8J4 393 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
ZEB1-211ENST00000558440 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
ZEB1-211ENST00000558440 CAPN5O15484 640 aaPredicted RBP9.71□□□□□ -0.86
ZEB1-211ENST00000558440 WIPF1O43516 503 aa9.71□□□□□ -0.86
ZEB1-211ENST00000558440 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
ZEB1-211ENST00000558440 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
ZEB1-211ENST00000558440 MTUS2Q5JR59 1369 aa9.71□□□□□ -0.86
ZEB1-211ENST00000558440 CPS1P31327 1500 aa9.71□□□□□ -0.86
ZEB1-211ENST00000558440 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.86
ZEB1-211ENST00000558440 TIAM1Q13009 1591 aa9.7□□□□□ -0.86
ZEB1-211ENST00000558440 TOM1O60784 492 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 AP1G2O75843 785 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
ZEB1-211ENST00000558440 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 ARID5BQ14865 1188 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 NEURL4Q96JN8 1562 aa9.69□□□□□ -0.86
ZEB1-211ENST00000558440 EHBP1L1Q8N3D4 1523 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 FAM135AQ9P2D6 1515 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 SHANK2Q9UPX8 1470 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 TNRQ92752 1358 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 BMP1P13497 986 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 HSPA1LP34931 641 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 TRIM46Q7Z4K8 759 aa9.68□□□□□ -0.86
ZEB1-211ENST00000558440 CFAP65Q6ZU64 1925 aaKnown RBP9.68□□□□□ -0.86
ZEB1-211ENST00000558440 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 RTEL1-TNFRSF6BF6WH68 1400 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 TIMP2P16035 220 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
ZEB1-211ENST00000558440 NR5A1Q13285 461 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 NR6A1Q15406 480 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 TRMT44Q8IYL2 757 aaKnown RBP9.67□□□□□ -0.86
ZEB1-211ENST00000558440 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
ZEB1-211ENST00000558440 FKBPLQ9UIM3 349 aa9.67□□□□□ -0.86
ZEB1-211ENST00000558440 PZPP20742 1482 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
ZEB1-211ENST00000558440 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
ZEB1-211ENST00000558440 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 RFC5P40937 340 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 GRM5P41594 1212 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 WDR4P57081 412 aaKnown RBP9.66□□□□□ -0.86
ZEB1-211ENST00000558440 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
ZEB1-211ENST00000558440 MAP4K5Q9Y4K4 846 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 IQGAP1P46940 1657 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 MBD5Q9P267 1494 aa9.66□□□□□ -0.86
ZEB1-211ENST00000558440 ZNF644Q9H582 1327 aaPredicted RBP9.65□□□□□ -0.86
ZEB1-211ENST00000558440 KIF3BO15066 747 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 NR3C2P08235 984 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 USP17L8P0C7I0 530 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 VWDEQ8N2E2 1590 aa9.65□□□□□ -0.86
ZEB1-211ENST00000558440 CCDC141Q6ZP82 1450 aa9.65□□□□□ -0.87
ZEB1-211ENST00000558440 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 ANKLE2Q86XL3 938 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
ZEB1-211ENST00000558440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
ZEB1-211ENST00000558440 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
ZEB1-211ENST00000558440 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
ZEB1-211ENST00000558440 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-211ENST00000558440 HMX1Q9NP08 348 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-211ENST00000558440 ZC3H13Q5T200 1668 aaKnown RBP9.63□□□□□ -0.87
ZEB1-211ENST00000558440 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-211ENST00000558440 CEP162Q5TB80 1403 aa9.63□□□□□ -0.87
ZEB1-211ENST00000558440 SYNMO15061 1565 aa9.63□□□□□ -0.87
ZEB1-211ENST00000558440 MED14O60244 1454 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
ZEB1-211ENST00000558440 FSHRP23945 695 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-211ENST00000558440 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 ARHGAP9Q9BRR9 750 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
ZEB1-211ENST00000558440 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
ZEB1-211ENST00000558440 ZIC2O95409 532 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-211ENST00000558440 MRPL14Q6P1L8 145 aaKnown RBP9.61□□□□□ -0.87
ZEB1-211ENST00000558440 ITPKCQ96DU7 683 aa9.61□□□□□ -0.87
ZEB1-211ENST00000558440 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms