RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 RNMTO43148 476 aaKnown RBP26.35■■□□□ 1.81
HIF1A-211ENST00000557446 PHACTR3Q96KR7 559 aa26.35■■□□□ 1.81
HIF1A-211ENST00000557446 LGR6Q9HBX8 967 aa26.35■■□□□ 1.81
HIF1A-211ENST00000557446 ZNF831Q5JPB2 1677 aa26.34■■□□□ 1.81
HIF1A-211ENST00000557446 LOC102724428A0A0B4J2F2 783 aa26.34■■□□□ 1.81
HIF1A-211ENST00000557446 SIK1P57059 783 aa26.34■■□□□ 1.81
HIF1A-211ENST00000557446 NFATC2IPQ8NCF5 419 aa26.34■■□□□ 1.81
HIF1A-211ENST00000557446 PDGFDQ9GZP0 370 aaPredicted RBP26.34■■□□□ 1.81
HIF1A-211ENST00000557446 GNAT3A8MTJ3 354 aa26.32■■□□□ 1.8
HIF1A-211ENST00000557446 SLC52A2Q9HAB3 445 aa26.32■■□□□ 1.8
HIF1A-211ENST00000557446 SIPA1L3O60292 1781 aaPredicted RBP26.31■■□□□ 1.8
HIF1A-211ENST00000557446 TFCP2L1Q9NZI6 479 aa26.3■■□□□ 1.8
HIF1A-211ENST00000557446 COL5A3P25940 1745 aaPredicted RBP26.3■■□□□ 1.8
HIF1A-211ENST00000557446 DLG5Q8TDM6 1919 aa26.29■■□□□ 1.8
HIF1A-211ENST00000557446 HMGB2P26583 209 aaKnown RBP26.29■■□□□ 1.8
HIF1A-211ENST00000557446 UBR3Q6ZT12 1888 aa26.28■■□□□ 1.8
HIF1A-211ENST00000557446 NEFMP07197 916 aa26.28■■□□□ 1.8
HIF1A-211ENST00000557446 ATP6V1AP38606 617 aa26.28■■□□□ 1.8
HIF1A-211ENST00000557446 RBM42Q9BTD8 480 aaKnown RBP26.28■■□□□ 1.8
HIF1A-211ENST00000557446 PNPLA7Q6ZV29 1317 aa26.28■■□□□ 1.8
HIF1A-211ENST00000557446 CICQ96RK0 1608 aaPredicted RBP26.28■■□□□ 1.8
HIF1A-211ENST00000557446 ZBTB7AO95365 584 aa26.27■■□□□ 1.8
HIF1A-211ENST00000557446 SPON1Q9HCB6 807 aa26.27■■□□□ 1.8
HIF1A-211ENST00000557446 TJP1Q07157 1748 aa26.27■■□□□ 1.8
HIF1A-211ENST00000557446 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
HIF1A-211ENST00000557446 ITPK1Q13572 414 aa26.26■■□□□ 1.79
HIF1A-211ENST00000557446 LINC00116Q8NCU8 138 aa26.26■■□□□ 1.79
HIF1A-211ENST00000557446 IL17REQ8NFR9 667 aa26.25■■□□□ 1.79
HIF1A-211ENST00000557446 CEMIPQ8WUJ3 1361 aa26.24■■□□□ 1.79
HIF1A-211ENST00000557446 AK7Q96M32 723 aa26.24■■□□□ 1.79
HIF1A-211ENST00000557446 SLC4A9Q96Q91 983 aa26.24■■□□□ 1.79
HIF1A-211ENST00000557446 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
HIF1A-211ENST00000557446 KCPQ6ZWJ8 1503 aa26.24■■□□□ 1.79
HIF1A-211ENST00000557446 PTCD1O75127 700 aaKnown RBP26.23■■□□□ 1.79
HIF1A-211ENST00000557446 TEFQ10587 303 aa26.23■■□□□ 1.79
HIF1A-211ENST00000557446 PNNQ9H307 717 aaKnown RBP26.23■■□□□ 1.79
HIF1A-211ENST00000557446 MAPK8IP3Q9UPT6 1336 aa26.22■■□□□ 1.79
HIF1A-211ENST00000557446 MTFR1LQ9H019 292 aa26.22■■□□□ 1.79
HIF1A-211ENST00000557446 SLC39A6Q13433 755 aa26.21■■□□□ 1.79
HIF1A-211ENST00000557446 RTF1Q92541 710 aaKnown RBP26.21■■□□□ 1.79
HIF1A-211ENST00000557446 WDR43Q15061 677 aaKnown RBP eCLIP26.2■■□□□ 1.78
HIF1A-211ENST00000557446 ATF5Q9Y2D1 282 aaPredicted RBP26.2■■□□□ 1.78
HIF1A-211ENST00000557446 COL24A1Q17RW2 1714 aa26.19■■□□□ 1.78
HIF1A-211ENST00000557446 SRCAPQ6ZRS2 3230 aa26.18■■□□□ 1.78
HIF1A-211ENST00000557446 MCM10Q7L590 875 aa26.18■■□□□ 1.78
HIF1A-211ENST00000557446 COL23A1Q86Y22 540 aaPredicted RBP26.18■■□□□ 1.78
HIF1A-211ENST00000557446 MYH14Q7Z406 1995 aaKnown RBP26.17■■□□□ 1.78
HIF1A-211ENST00000557446 GNPATO15228 680 aa26.17■■□□□ 1.78
HIF1A-211ENST00000557446 MSH5O43196 834 aa26.17■■□□□ 1.78
HIF1A-211ENST00000557446 AMIGO3Q86WK7 504 aa26.17■■□□□ 1.78
HIF1A-211ENST00000557446 SLC16A10Q8TF71 515 aa26.17■■□□□ 1.78
HIF1A-211ENST00000557446 HTATSF1O43719 755 aaKnown RBP26.16■■□□□ 1.78
HIF1A-211ENST00000557446 PHF14O94880 888 aa26.16■■□□□ 1.78
HIF1A-211ENST00000557446 DCTN1Q14203 1278 aa26.16■■□□□ 1.78
HIF1A-211ENST00000557446 NFE2L2Q16236 605 aa26.16■■□□□ 1.78
HIF1A-211ENST00000557446 TTC5Q8N0Z6 440 aa26.16■■□□□ 1.78
HIF1A-211ENST00000557446 FLAD1Q8NFF5 587 aa26.16■■□□□ 1.78
HIF1A-211ENST00000557446 PPP1R1BQ9UD71 204 aaPredicted RBP26.16■■□□□ 1.78
HIF1A-211ENST00000557446 CNTNAP4Q9C0A0 1308 aa26.15■■□□□ 1.78
HIF1A-211ENST00000557446 ANP32CO43423 234 aa26.15■■□□□ 1.78
HIF1A-211ENST00000557446 PTGER2P43116 358 aa26.15■■□□□ 1.78
HIF1A-211ENST00000557446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.14■■□□□ 1.78
HIF1A-211ENST00000557446 SSFA2P28290 1259 aa26.13■■□□□ 1.77
HIF1A-211ENST00000557446 SMIM5Q71RC9 77 aa26.13■■□□□ 1.77
HIF1A-211ENST00000557446 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
HIF1A-211ENST00000557446 ZNF790Q6PG37 636 aa26.12■■□□□ 1.77
HIF1A-211ENST00000557446 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
HIF1A-211ENST00000557446 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
HIF1A-211ENST00000557446 SGIP1Q9BQI5 828 aa26.12■■□□□ 1.77
HIF1A-211ENST00000557446 BTBD11A6QL63 1104 aa26.11■■□□□ 1.77
HIF1A-211ENST00000557446 RC3H1Q5TC82 1133 aaKnown RBP26.11■■□□□ 1.77
HIF1A-211ENST00000557446 ADAMTS8Q9UP79 889 aa26.11■■□□□ 1.77
HIF1A-211ENST00000557446 CRKLP46109 303 aaKnown RBP26.1■■□□□ 1.77
HIF1A-211ENST00000557446 RTCBQ9Y3I0 505 aaKnown RBP26.1■■□□□ 1.77
HIF1A-211ENST00000557446 VSIG10Q8N0Z9 540 aa26.09■■□□□ 1.77
HIF1A-211ENST00000557446 KDM3BQ7LBC6 1761 aa26.09■■□□□ 1.77
HIF1A-211ENST00000557446 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.77
HIF1A-211ENST00000557446 CCDC184Q52MB2 194 aa26.08■■□□□ 1.77
HIF1A-211ENST00000557446 MSL1Q68DK7 614 aa26.08■■□□□ 1.77
HIF1A-211ENST00000557446 RUNDC1Q96C34 613 aa26.08■■□□□ 1.77
HIF1A-211ENST00000557446 ZNF496Q96IT1 587 aaPredicted RBP26.08■■□□□ 1.77
HIF1A-211ENST00000557446 KCNQ3O43525 872 aa26.06■■□□□ 1.76
HIF1A-211ENST00000557446 RPS6KA4O75676 772 aa26.06■■□□□ 1.76
HIF1A-211ENST00000557446 POLD1P28340 1107 aa26.06■■□□□ 1.76
HIF1A-211ENST00000557446 TMPOP42166 694 aaKnown RBP26.06■■□□□ 1.76
HIF1A-211ENST00000557446 RIPK4P57078 832 aa26.06■■□□□ 1.76
HIF1A-211ENST00000557446 FMNL2Q96PY5 1086 aa26.06■■□□□ 1.76
HIF1A-211ENST00000557446 THUMPD2Q9BTF0 503 aaKnown RBP26.06■■□□□ 1.76
HIF1A-211ENST00000557446 CYP19A1P11511 503 aaPredicted RBP26.05■■□□□ 1.76
HIF1A-211ENST00000557446 ADRA2BP18089 450 aa26.04■■□□□ 1.76
HIF1A-211ENST00000557446 TAF7Q15545 349 aaPredicted RBP26.04■■□□□ 1.76
HIF1A-211ENST00000557446 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
HIF1A-211ENST00000557446 ARXQ96QS3 562 aa26.04■■□□□ 1.76
HIF1A-211ENST00000557446 CCDC87Q9NVE4 849 aa26.04■■□□□ 1.76
HIF1A-211ENST00000557446 RRP7AQ9Y3A4 280 aaKnown RBP26.04■■□□□ 1.76
HIF1A-211ENST00000557446 LMOD3Q0VAK6 560 aa26.03■■□□□ 1.76
HIF1A-211ENST00000557446 TRAPPC3LQ5T215 181 aa26.03■■□□□ 1.76
HIF1A-211ENST00000557446 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
HIF1A-211ENST00000557446 NEUROD2Q15784 382 aa26.01■■□□□ 1.75
HIF1A-211ENST00000557446 ARHGEF1Q92888 912 aaKnown RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms