RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
TRAPPC6B-206ENST00000556765 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
TRAPPC6B-206ENST00000556765 A0A0G2JLW4 131 aa19.08■□□□□ 0.64
TRAPPC6B-206ENST00000556765 RRAGCQ9HB90 399 aa19.08■□□□□ 0.64
TRAPPC6B-206ENST00000556765 FCHSD2O94868 740 aa19.07■□□□□ 0.64
TRAPPC6B-206ENST00000556765 MMP10P09238 476 aa19.07■□□□□ 0.64
TRAPPC6B-206ENST00000556765 AMER1Q5JTC6 1135 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC6B-206ENST00000556765 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
TRAPPC6B-206ENST00000556765 PCDH10Q9P2E7 1040 aa19.07■□□□□ 0.64
TRAPPC6B-206ENST00000556765 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
TRAPPC6B-206ENST00000556765 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
TRAPPC6B-206ENST00000556765 TNRC6CQ9HCJ0 1690 aaKnown RBP19.05■□□□□ 0.64
TRAPPC6B-206ENST00000556765 CD163L1Q9NR16 1453 aa19.04■□□□□ 0.64
TRAPPC6B-206ENST00000556765 SMARCC1Q92922 1105 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC6B-206ENST00000556765 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
TRAPPC6B-206ENST00000556765 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
TRAPPC6B-206ENST00000556765 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
TRAPPC6B-206ENST00000556765 DPEP1P16444 411 aa19.03■□□□□ 0.64
TRAPPC6B-206ENST00000556765 TERF2IPQ9NYB0 399 aa19.03■□□□□ 0.64
TRAPPC6B-206ENST00000556765 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
TRAPPC6B-206ENST00000556765 HOXC9P31274 260 aa19.02■□□□□ 0.64
TRAPPC6B-206ENST00000556765 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
TRAPPC6B-206ENST00000556765 LINC00116Q8NCU8 138 aa19.01■□□□□ 0.63
TRAPPC6B-206ENST00000556765 GNPATO15228 680 aa19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 RAPGEF4Q8WZA2 1011 aa19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 MAP3K19Q56UN5 1328 aa19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
TRAPPC6B-206ENST00000556765 AMPHP49418 695 aa18.99■□□□□ 0.63
TRAPPC6B-206ENST00000556765 USHBP1Q8N6Y0 703 aa18.99■□□□□ 0.63
TRAPPC6B-206ENST00000556765 KIF20BQ96Q89 1820 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 ARFGEF1Q9Y6D6 1849 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 NBPF6Q5VWK0 638 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 NBPF4Q96M43 638 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 SLC12A5Q9H2X9 1139 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
TRAPPC6B-206ENST00000556765 LOC102724428A0A0B4J2F2 783 aa18.97■□□□□ 0.63
TRAPPC6B-206ENST00000556765 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC6B-206ENST00000556765 SIK1P57059 783 aa18.97■□□□□ 0.63
TRAPPC6B-206ENST00000556765 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
TRAPPC6B-206ENST00000556765 CARD14Q9BXL6 1004 aa18.97■□□□□ 0.63
TRAPPC6B-206ENST00000556765 MAP2P11137 1827 aaKnown RBP18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 ITGB4P16144 1822 aa18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 KCNA3P22001 575 aa18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 FAM9BQ8IZU0 186 aa18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 DCAF5Q96JK2 942 aa18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 ZBED9Q6R2W3 1325 aa18.96■□□□□ 0.63
TRAPPC6B-206ENST00000556765 A0A1W2PP64 1363 aa18.95■□□□□ 0.62
TRAPPC6B-206ENST00000556765 NLGN1Q8N2Q7 840 aa18.95■□□□□ 0.62
TRAPPC6B-206ENST00000556765 PIGBQ92521 554 aa18.95■□□□□ 0.62
TRAPPC6B-206ENST00000556765 PIM2Q9P1W9 311 aa18.95■□□□□ 0.62
TRAPPC6B-206ENST00000556765 CYP27B1O15528 508 aa18.94■□□□□ 0.62
TRAPPC6B-206ENST00000556765 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
TRAPPC6B-206ENST00000556765 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
TRAPPC6B-206ENST00000556765 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
TRAPPC6B-206ENST00000556765 FBLN1P23142 703 aa18.93■□□□□ 0.62
TRAPPC6B-206ENST00000556765 ITPK1Q13572 414 aa18.93■□□□□ 0.62
TRAPPC6B-206ENST00000556765 DALRD3Q5D0E6 543 aaKnown RBP18.93■□□□□ 0.62
TRAPPC6B-206ENST00000556765 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
TRAPPC6B-206ENST00000556765 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
TRAPPC6B-206ENST00000556765 FOXN1O15353 648 aa18.92■□□□□ 0.62
TRAPPC6B-206ENST00000556765 VEGFAP15692 232 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC6B-206ENST00000556765 PARP3Q9Y6F1 533 aa18.92■□□□□ 0.62
TRAPPC6B-206ENST00000556765 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC6B-206ENST00000556765 COG3Q96JB2 828 aa18.91■□□□□ 0.62
TRAPPC6B-206ENST00000556765 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
TRAPPC6B-206ENST00000556765 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
TRAPPC6B-206ENST00000556765 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
TRAPPC6B-206ENST00000556765 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
TRAPPC6B-206ENST00000556765 SBF1O95248 1867 aa18.9■□□□□ 0.62
TRAPPC6B-206ENST00000556765 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
TRAPPC6B-206ENST00000556765 MKRN1Q9UHC7 482 aaKnown RBP18.89■□□□□ 0.61
TRAPPC6B-206ENST00000556765 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
TRAPPC6B-206ENST00000556765 GYS1P13807 737 aa18.88■□□□□ 0.61
TRAPPC6B-206ENST00000556765 GLTPD2A6NH11 291 aa18.87■□□□□ 0.61
TRAPPC6B-206ENST00000556765 ASAP1Q9ULH1 1129 aa18.87■□□□□ 0.61
TRAPPC6B-206ENST00000556765 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
TRAPPC6B-206ENST00000556765 ARHGEF1Q92888 912 aaKnown RBP18.86■□□□□ 0.61
TRAPPC6B-206ENST00000556765 CREBZFQ9NS37 354 aa18.86■□□□□ 0.61
TRAPPC6B-206ENST00000556765 KDM6AO15550 1401 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC6B-206ENST00000556765 ADRA2BP18089 450 aa18.85■□□□□ 0.61
TRAPPC6B-206ENST00000556765 CTCFP49711 727 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC6B-206ENST00000556765 RASSF7Q02833 373 aa18.85■□□□□ 0.61
TRAPPC6B-206ENST00000556765 TMOD3Q9NYL9 352 aa18.85■□□□□ 0.61
TRAPPC6B-206ENST00000556765 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAPPC6B-206ENST00000556765 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC6B-206ENST00000556765 AIDAQ96BJ3 306 aa18.84■□□□□ 0.61
TRAPPC6B-206ENST00000556765 CHRNA5P30532 468 aa18.83■□□□□ 0.6
TRAPPC6B-206ENST00000556765 RFC4P35249 363 aa18.83■□□□□ 0.6
TRAPPC6B-206ENST00000556765 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
TRAPPC6B-206ENST00000556765 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
TRAPPC6B-206ENST00000556765 CFAP53Q96M91 514 aa18.83■□□□□ 0.6
TRAPPC6B-206ENST00000556765 LMNB1P20700 586 aa18.82■□□□□ 0.6
TRAPPC6B-206ENST00000556765 KDRP35968 1356 aa18.81■□□□□ 0.6
TRAPPC6B-206ENST00000556765 CNTNAP1P78357 1384 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms