RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
TRAPPC6B-206ENST00000556765 ABCC9O60706 1549 aa32.32■■■□□ 2.76
TRAPPC6B-206ENST00000556765 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
TRAPPC6B-206ENST00000556765 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
TRAPPC6B-206ENST00000556765 RB1CC1Q8TDY2 1594 aa30.33■■■□□ 2.45
TRAPPC6B-206ENST00000556765 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
TRAPPC6B-206ENST00000556765 NACADO15069 1562 aa29.89■■■□□ 2.38
TRAPPC6B-206ENST00000556765 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
TRAPPC6B-206ENST00000556765 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
TRAPPC6B-206ENST00000556765 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
TRAPPC6B-206ENST00000556765 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
TRAPPC6B-206ENST00000556765 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
TRAPPC6B-206ENST00000556765 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
TRAPPC6B-206ENST00000556765 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
TRAPPC6B-206ENST00000556765 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
TRAPPC6B-206ENST00000556765 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
TRAPPC6B-206ENST00000556765 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
TRAPPC6B-206ENST00000556765 DCAF1Q9Y4B6 1507 aa28.44■■■□□ 2.14
TRAPPC6B-206ENST00000556765 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
TRAPPC6B-206ENST00000556765 CUX2O14529 1486 aa28.25■■■□□ 2.11
TRAPPC6B-206ENST00000556765 ERCC6Q03468 1493 aa27.98■■■□□ 2.07
TRAPPC6B-206ENST00000556765 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
TRAPPC6B-206ENST00000556765 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
TRAPPC6B-206ENST00000556765 NESP48681 1621 aa27.49■■□□□ 1.99
TRAPPC6B-206ENST00000556765 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
TRAPPC6B-206ENST00000556765 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
TRAPPC6B-206ENST00000556765 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
TRAPPC6B-206ENST00000556765 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
TRAPPC6B-206ENST00000556765 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
TRAPPC6B-206ENST00000556765 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
TRAPPC6B-206ENST00000556765 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
TRAPPC6B-206ENST00000556765 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
TRAPPC6B-206ENST00000556765 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
TRAPPC6B-206ENST00000556765 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC6B-206ENST00000556765 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
TRAPPC6B-206ENST00000556765 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
TRAPPC6B-206ENST00000556765 WDR62O43379 1518 aa26.81■■□□□ 1.88
TRAPPC6B-206ENST00000556765 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
TRAPPC6B-206ENST00000556765 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
TRAPPC6B-206ENST00000556765 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
TRAPPC6B-206ENST00000556765 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
TRAPPC6B-206ENST00000556765 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
TRAPPC6B-206ENST00000556765 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
TRAPPC6B-206ENST00000556765 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
TRAPPC6B-206ENST00000556765 FANCD2Q9BXW9 1451 aa26.44■■□□□ 1.82
TRAPPC6B-206ENST00000556765 ARHGEF11O15085 1522 aa26.38■■□□□ 1.81
TRAPPC6B-206ENST00000556765 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
TRAPPC6B-206ENST00000556765 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC6B-206ENST00000556765 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
TRAPPC6B-206ENST00000556765 CFTRP13569 1480 aa26.23■■□□□ 1.79
TRAPPC6B-206ENST00000556765 WIZO95785 1651 aa26.21■■□□□ 1.79
TRAPPC6B-206ENST00000556765 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
TRAPPC6B-206ENST00000556765 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC6B-206ENST00000556765 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
TRAPPC6B-206ENST00000556765 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
TRAPPC6B-206ENST00000556765 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
TRAPPC6B-206ENST00000556765 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
TRAPPC6B-206ENST00000556765 CHD1O14646 1710 aa25.88■■□□□ 1.73
TRAPPC6B-206ENST00000556765 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
TRAPPC6B-206ENST00000556765 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
TRAPPC6B-206ENST00000556765 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
TRAPPC6B-206ENST00000556765 FBLN2P98095 1184 aa25.78■■□□□ 1.72
TRAPPC6B-206ENST00000556765 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
TRAPPC6B-206ENST00000556765 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
TRAPPC6B-206ENST00000556765 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
TRAPPC6B-206ENST00000556765 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
TRAPPC6B-206ENST00000556765 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.69
TRAPPC6B-206ENST00000556765 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
TRAPPC6B-206ENST00000556765 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC6B-206ENST00000556765 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
TRAPPC6B-206ENST00000556765 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
TRAPPC6B-206ENST00000556765 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
TRAPPC6B-206ENST00000556765 RAD54L2Q9Y4B4 1467 aa25.43■■□□□ 1.66
TRAPPC6B-206ENST00000556765 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
TRAPPC6B-206ENST00000556765 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
TRAPPC6B-206ENST00000556765 SOGA1O94964 1423 aa25.37■■□□□ 1.65
TRAPPC6B-206ENST00000556765 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC6B-206ENST00000556765 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
TRAPPC6B-206ENST00000556765 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
TRAPPC6B-206ENST00000556765 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
TRAPPC6B-206ENST00000556765 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
TRAPPC6B-206ENST00000556765 ILDR1Q86SU0 546 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC6B-206ENST00000556765 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
TRAPPC6B-206ENST00000556765 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
TRAPPC6B-206ENST00000556765 KIF13AQ9H1H9 1805 aa25.06■■□□□ 1.6
TRAPPC6B-206ENST00000556765 CUX1P39880 1505 aa25.04■■□□□ 1.6
TRAPPC6B-206ENST00000556765 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
TRAPPC6B-206ENST00000556765 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
TRAPPC6B-206ENST00000556765 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
TRAPPC6B-206ENST00000556765 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
TRAPPC6B-206ENST00000556765 NUP160Q12769 1436 aa24.89■■□□□ 1.58
TRAPPC6B-206ENST00000556765 SHROOM2Q13796 1616 aa24.87■■□□□ 1.57
TRAPPC6B-206ENST00000556765 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
TRAPPC6B-206ENST00000556765 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
TRAPPC6B-206ENST00000556765 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
TRAPPC6B-206ENST00000556765 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
TRAPPC6B-206ENST00000556765 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
TRAPPC6B-206ENST00000556765 KDM6BO15054 1643 aa24.78■■□□□ 1.56
TRAPPC6B-206ENST00000556765 DIP2BQ9P265 1576 aa24.74■■□□□ 1.55
TRAPPC6B-206ENST00000556765 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms