RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
ABCD4-225ENST00000556517 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
ABCD4-225ENST00000556517 ZNF521Q96K83 1311 aa16.29■□□□□ 0.2
ABCD4-225ENST00000556517 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
ABCD4-225ENST00000556517 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
ABCD4-225ENST00000556517 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
ABCD4-225ENST00000556517 BCL11BQ9C0K0 894 aaPredicted RBP16.28■□□□□ 0.2
ABCD4-225ENST00000556517 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
ABCD4-225ENST00000556517 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
ABCD4-225ENST00000556517 E9PSI1 815 aa16.27■□□□□ 0.2
ABCD4-225ENST00000556517 PIGBQ92521 554 aa16.27■□□□□ 0.2
ABCD4-225ENST00000556517 KCNQ2O43526 872 aa16.26■□□□□ 0.19
ABCD4-225ENST00000556517 TRIM37O94972 964 aa16.26■□□□□ 0.19
ABCD4-225ENST00000556517 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
ABCD4-225ENST00000556517 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
ABCD4-225ENST00000556517 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
ABCD4-225ENST00000556517 CHL1O00533 1208 aa16.24■□□□□ 0.19
ABCD4-225ENST00000556517 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
ABCD4-225ENST00000556517 MIS18AQ9NYP9 233 aa16.24■□□□□ 0.19
ABCD4-225ENST00000556517 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
ABCD4-225ENST00000556517 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
ABCD4-225ENST00000556517 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
ABCD4-225ENST00000556517 ITGB4P16144 1822 aa16.22■□□□□ 0.19
ABCD4-225ENST00000556517 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
ABCD4-225ENST00000556517 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
ABCD4-225ENST00000556517 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
ABCD4-225ENST00000556517 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
ABCD4-225ENST00000556517 PAPPAQ13219 1627 aa16.21■□□□□ 0.19
ABCD4-225ENST00000556517 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
ABCD4-225ENST00000556517 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
ABCD4-225ENST00000556517 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
ABCD4-225ENST00000556517 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
ABCD4-225ENST00000556517 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
ABCD4-225ENST00000556517 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
ABCD4-225ENST00000556517 APBA3O96018 575 aa16.2■□□□□ 0.18
ABCD4-225ENST00000556517 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
ABCD4-225ENST00000556517 CDCA7LQ96GN5 454 aa16.2■□□□□ 0.18
ABCD4-225ENST00000556517 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
ABCD4-225ENST00000556517 BTAF1O14981 1849 aa16.19■□□□□ 0.18
ABCD4-225ENST00000556517 KDM3BQ7LBC6 1761 aa16.19■□□□□ 0.18
ABCD4-225ENST00000556517 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
ABCD4-225ENST00000556517 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-225ENST00000556517 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
ABCD4-225ENST00000556517 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
ABCD4-225ENST00000556517 EP400Q96L91 3159 aa16.18■□□□□ 0.18
ABCD4-225ENST00000556517 KCNQ3O43525 872 aa16.17■□□□□ 0.18
ABCD4-225ENST00000556517 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
ABCD4-225ENST00000556517 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
ABCD4-225ENST00000556517 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
ABCD4-225ENST00000556517 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
ABCD4-225ENST00000556517 BAG6P46379 1132 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 SIK1P57059 783 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
ABCD4-225ENST00000556517 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
ABCD4-225ENST00000556517 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-225ENST00000556517 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
ABCD4-225ENST00000556517 PLSCR1O15162 318 aa16.15■□□□□ 0.18
ABCD4-225ENST00000556517 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
ABCD4-225ENST00000556517 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
ABCD4-225ENST00000556517 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-225ENST00000556517 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-225ENST00000556517 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
ABCD4-225ENST00000556517 HOXB7P09629 217 aa16.14■□□□□ 0.17
ABCD4-225ENST00000556517 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
ABCD4-225ENST00000556517 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
ABCD4-225ENST00000556517 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
ABCD4-225ENST00000556517 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-225ENST00000556517 STARD3NLO95772 234 aa16.13■□□□□ 0.17
ABCD4-225ENST00000556517 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-225ENST00000556517 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
ABCD4-225ENST00000556517 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
ABCD4-225ENST00000556517 ILDR2Q71H61 639 aa16.12■□□□□ 0.17
ABCD4-225ENST00000556517 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
ABCD4-225ENST00000556517 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-225ENST00000556517 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
ABCD4-225ENST00000556517 TXNRD1Q16881 649 aa16.11■□□□□ 0.17
ABCD4-225ENST00000556517 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
ABCD4-225ENST00000556517 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
ABCD4-225ENST00000556517 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
ABCD4-225ENST00000556517 LY75O60449 1722 aa16.1■□□□□ 0.17
ABCD4-225ENST00000556517 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
ABCD4-225ENST00000556517 EN1Q05925 392 aaPredicted RBP16.09■□□□□ 0.17
ABCD4-225ENST00000556517 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
ABCD4-225ENST00000556517 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
ABCD4-225ENST00000556517 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
ABCD4-225ENST00000556517 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
ABCD4-225ENST00000556517 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
ABCD4-225ENST00000556517 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.17
ABCD4-225ENST00000556517 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
ABCD4-225ENST00000556517 ITPK1Q13572 414 aa16.08■□□□□ 0.16
ABCD4-225ENST00000556517 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
ABCD4-225ENST00000556517 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
ABCD4-225ENST00000556517 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 KCNQ4P56696 695 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 NECTIN2Q92692 538 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
ABCD4-225ENST00000556517 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms