RNA–Protein interactions for RNA: ENST00000555787.1

PSMC1-206, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 2,246 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-206ENST00000555787 PPME1Q9Y570 386 aa10.29□□□□□ -0.76
PSMC1-206ENST00000555787 PCDHGB7Q9Y5F8 929 aa10.29□□□□□ -0.76
PSMC1-206ENST00000555787 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
PSMC1-206ENST00000555787 RGL4Q8IZJ4 473 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 C1orf216Q8TAB5 229 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 PARP2Q9UGN5 583 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 TBX22Q9Y458 520 aa10.28□□□□□ -0.76
PSMC1-206ENST00000555787 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.76
PSMC1-206ENST00000555787 SDE2Q6IQ49 451 aa10.27□□□□□ -0.76
PSMC1-206ENST00000555787 ZSCAN29Q8IWY8 852 aaPredicted RBP10.27□□□□□ -0.76
PSMC1-206ENST00000555787 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.76
PSMC1-206ENST00000555787 COL17A1Q9UMD9 1497 aaPredicted RBP10.27□□□□□ -0.76
PSMC1-206ENST00000555787 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 MAPK8P45983 427 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
PSMC1-206ENST00000555787 PLCH2O75038 1416 aa10.26□□□□□ -0.77
PSMC1-206ENST00000555787 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
PSMC1-206ENST00000555787 DUSP9Q99956 384 aaKnown RBP10.26□□□□□ -0.77
PSMC1-206ENST00000555787 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
PSMC1-206ENST00000555787 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
PSMC1-206ENST00000555787 ZNF394Q53GI3 561 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 TPCN2Q8NHX9 752 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 SUGT1Q9Y2Z0 365 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 FANCAO15360 1455 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
PSMC1-206ENST00000555787 ARSIQ5FYB1 569 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 PCDHB9Q9Y5E1 797 aa10.25□□□□□ -0.77
PSMC1-206ENST00000555787 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
PSMC1-206ENST00000555787 BMS1Q14692 1282 aaKnown RBP10.24□□□□□ -0.77
PSMC1-206ENST00000555787 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
PSMC1-206ENST00000555787 CCSER2Q9H7U1 834 aa10.24□□□□□ -0.77
PSMC1-206ENST00000555787 MRPL42Q9Y6G3 142 aaKnown RBP10.24□□□□□ -0.77
PSMC1-206ENST00000555787 MYO5CQ9NQX4 1742 aa10.24□□□□□ -0.77
PSMC1-206ENST00000555787 SEC24BO95487 1268 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 TSEN2Q8NCE0 465 aaKnown RBP10.23□□□□□ -0.77
PSMC1-206ENST00000555787 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 AKNAQ7Z591 1439 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 LZTS3O60299 673 aaPredicted RBP10.23□□□□□ -0.77
PSMC1-206ENST00000555787 PARNO95453 639 aaKnown RBP10.23□□□□□ -0.77
PSMC1-206ENST00000555787 EML3Q32P44 896 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 VPS8Q8N3P4 1428 aa10.23□□□□□ -0.77
PSMC1-206ENST00000555787 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
PSMC1-206ENST00000555787 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
PSMC1-206ENST00000555787 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
PSMC1-206ENST00000555787 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
PSMC1-206ENST00000555787 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
PSMC1-206ENST00000555787 EHBP1L1Q8N3D4 1523 aa10.21□□□□□ -0.77
PSMC1-206ENST00000555787 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
PSMC1-206ENST00000555787 CCDC85AQ96PX6 553 aaPredicted RBP10.21□□□□□ -0.77
PSMC1-206ENST00000555787 MAP3K1Q13233 1512 aa10.21□□□□□ -0.78
PSMC1-206ENST00000555787 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.78
PSMC1-206ENST00000555787 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.78
PSMC1-206ENST00000555787 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.78
PSMC1-206ENST00000555787 PSMD1Q99460 953 aa10.21□□□□□ -0.78
PSMC1-206ENST00000555787 PRDM16Q9HAZ2 1276 aa10.21□□□□□ -0.78
PSMC1-206ENST00000555787 MRS2Q9HD23 443 aa10.21□□□□□ -0.78
PSMC1-206ENST00000555787 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.78
PSMC1-206ENST00000555787 ZMYM4Q5VZL5 1548 aa10.2□□□□□ -0.78
PSMC1-206ENST00000555787 PREX2Q70Z35 1606 aa10.2□□□□□ -0.78
PSMC1-206ENST00000555787 SEC13P55735 322 aa10.2□□□□□ -0.78
PSMC1-206ENST00000555787 MAGI2Q86UL8 1455 aa10.2□□□□□ -0.78
PSMC1-206ENST00000555787 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
PSMC1-206ENST00000555787 MPSTP25325 297 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 GTF2IP78347 998 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 LYPD8Q6UX82 237 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 SIX5Q8N196 739 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 TMC1Q8TDI8 760 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 VTI1BQ9UEU0 232 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 RIPOR2Q9Y4F9 1068 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 EMILIN1Q9Y6C2 1016 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 ADGRL1O94910 1474 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 CFHP08603 1231 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 RACK1P63244 317 aaKnown RBP10.19□□□□□ -0.78
PSMC1-206ENST00000555787 PTPROQ16827 1216 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 RNF34Q969K3 372 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 RICTORQ6R327 1708 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 MTUS2Q5JR59 1369 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
PSMC1-206ENST00000555787 TREHO43280 583 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 PSME1Q06323 249 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 RETREG3Q86VR2 466 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 POGZQ7Z3K3 1410 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 hCG_2014768A0A024R1R8 64 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 PEX14O75381 377 aa10.18□□□□□ -0.78
PSMC1-206ENST00000555787 TIAM1Q13009 1591 aa10.17□□□□□ -0.78
PSMC1-206ENST00000555787 SORBS3O60504 671 aa10.17□□□□□ -0.78
PSMC1-206ENST00000555787 RNF40O75150 1001 aa10.17□□□□□ -0.78
PSMC1-206ENST00000555787 MAP4K4O95819 1239 aaPredicted RBP10.17□□□□□ -0.78
PSMC1-206ENST00000555787 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
PSMC1-206ENST00000555787 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms