RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 LY75O60449 1722 aa18.86■□□□□ 0.61
NME1-NME2-203ENST00000555572 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
NME1-NME2-203ENST00000555572 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
NME1-NME2-203ENST00000555572 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
NME1-NME2-203ENST00000555572 POLD1P28340 1107 aa18.85■□□□□ 0.61
NME1-NME2-203ENST00000555572 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
NME1-NME2-203ENST00000555572 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
NME1-NME2-203ENST00000555572 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
NME1-NME2-203ENST00000555572 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
NME1-NME2-203ENST00000555572 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
NME1-NME2-203ENST00000555572 GPR162Q16538 588 aa18.82■□□□□ 0.6
NME1-NME2-203ENST00000555572 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
NME1-NME2-203ENST00000555572 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
NME1-NME2-203ENST00000555572 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
NME1-NME2-203ENST00000555572 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
NME1-NME2-203ENST00000555572 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
NME1-NME2-203ENST00000555572 IFNL2Q8IZJ0 200 aa18.81■□□□□ 0.6
NME1-NME2-203ENST00000555572 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
NME1-NME2-203ENST00000555572 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
NME1-NME2-203ENST00000555572 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
NME1-NME2-203ENST00000555572 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
NME1-NME2-203ENST00000555572 PHKG2P15735 406 aa18.79■□□□□ 0.6
NME1-NME2-203ENST00000555572 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
NME1-NME2-203ENST00000555572 NLGN2Q8NFZ4 835 aa18.79■□□□□ 0.6
NME1-NME2-203ENST00000555572 CYP27B1O15528 508 aa18.78■□□□□ 0.6
NME1-NME2-203ENST00000555572 TMPOP42166 694 aaKnown RBP18.78■□□□□ 0.6
NME1-NME2-203ENST00000555572 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
NME1-NME2-203ENST00000555572 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
NME1-NME2-203ENST00000555572 HTATSF1O43719 755 aaKnown RBP18.77■□□□□ 0.6
NME1-NME2-203ENST00000555572 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
NME1-NME2-203ENST00000555572 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
NME1-NME2-203ENST00000555572 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.59
NME1-NME2-203ENST00000555572 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 APAF1O14727 1248 aa18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 HMGB2P26583 209 aaKnown RBP18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 C1QTNF8P60827 252 aa18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 KLHL34Q8N239 644 aa18.76■□□□□ 0.59
NME1-NME2-203ENST00000555572 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
NME1-NME2-203ENST00000555572 RIPK4P57078 832 aa18.74■□□□□ 0.59
NME1-NME2-203ENST00000555572 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
NME1-NME2-203ENST00000555572 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
NME1-NME2-203ENST00000555572 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.593e-9■■□□□ 12.4
NME1-NME2-203ENST00000555572 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
NME1-NME2-203ENST00000555572 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
NME1-NME2-203ENST00000555572 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
NME1-NME2-203ENST00000555572 MPRIPQ6WCQ1 1025 aa18.72■□□□□ 0.59
NME1-NME2-203ENST00000555572 TOGARAM1Q9Y4F4 1720 aa18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 MSH5O43196 834 aa18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 TAF1LQ8IZX4 1826 aa18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 KDM6AO15550 1401 aaPredicted RBP18.71■□□□□ 0.59
NME1-NME2-203ENST00000555572 CEMIPQ8WUJ3 1361 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 RNMTO43148 476 aaKnown RBP18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 MSL1Q68DK7 614 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 PIGBQ92521 554 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 MRC1P22897 1456 aa18.7■□□□□ 0.58
NME1-NME2-203ENST00000555572 C5P01031 1676 aa18.69■□□□□ 0.58
NME1-NME2-203ENST00000555572 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
NME1-NME2-203ENST00000555572 ITGB4P16144 1822 aa18.69■□□□□ 0.58
NME1-NME2-203ENST00000555572 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
NME1-NME2-203ENST00000555572 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
NME1-NME2-203ENST00000555572 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
NME1-NME2-203ENST00000555572 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
NME1-NME2-203ENST00000555572 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
NME1-NME2-203ENST00000555572 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
NME1-NME2-203ENST00000555572 TEFQ10587 303 aa18.66■□□□□ 0.58
NME1-NME2-203ENST00000555572 MCM10Q7L590 875 aa18.66■□□□□ 0.58
NME1-NME2-203ENST00000555572 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
NME1-NME2-203ENST00000555572 GIGYF1O75420 1035 aaPredicted RBP18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 CABP4P57796 275 aa18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 HNRNPUQ00839 825 aaKnown RBP eCLIP18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
NME1-NME2-203ENST00000555572 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
NME1-NME2-203ENST00000555572 SIK1P57059 783 aa18.64■□□□□ 0.57
NME1-NME2-203ENST00000555572 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
NME1-NME2-203ENST00000555572 AK7Q96M32 723 aa18.64■□□□□ 0.57
NME1-NME2-203ENST00000555572 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
NME1-NME2-203ENST00000555572 UBR3Q6ZT12 1888 aa18.63■□□□□ 0.57
NME1-NME2-203ENST00000555572 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
NME1-NME2-203ENST00000555572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 SSFA2P28290 1259 aa18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 IL16Q14005 1332 aa18.62■□□□□ 0.57
NME1-NME2-203ENST00000555572 ZNF521Q96K83 1311 aa18.61■□□□□ 0.57
NME1-NME2-203ENST00000555572 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
NME1-NME2-203ENST00000555572 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
NME1-NME2-203ENST00000555572 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
NME1-NME2-203ENST00000555572 ZBED9Q6R2W3 1325 aa18.6■□□□□ 0.57
NME1-NME2-203ENST00000555572 ITPK1Q13572 414 aa18.6■□□□□ 0.57
NME1-NME2-203ENST00000555572 NFATC2IPQ8NCF5 419 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms