RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 GLRX3O76003 335 aaKnown RBP9.95□□□□□ -0.82
LINC00641-201ENST00000555379 POLD1P28340 1107 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CYP46A1Q9Y6A2 500 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 KIF20AO95235 890 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC12Q8WUD4 166 aaPredicted RBP9.95□□□□□ -0.82
LINC00641-201ENST00000555379 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 PDCL3Q9H2J4 239 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 KCNA4P22459 653 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MAP3K12Q12852 859 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 PPP1R1BQ9UD71 204 aaPredicted RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 HDAC9Q9UKV0 1011 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 PDE4AP27815 886 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 UBAC1Q9BSL1 405 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MYO1BO43795 1136 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 SMC2O95347 1197 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 KCNA6P17658 529 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 MAGEC2Q9UBF1 373 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 FLT4P35916 1363 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PES1O00541 588 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 BAG3O95817 575 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 BCL2L13Q9BXK5 485 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 RAB34Q9BZG1 259 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 U3KPZ7 1027 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PPP4R3AQ6IN85 833 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 CT47A1Q5JQC4 288 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 C22orf23Q9BZE7 217 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 ALDH1L1O75891 902 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 SYCP1Q15431 976 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 MPHOSPH10O00566 681 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 FLAD1Q8NFF5 587 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 EYA3Q99504 573 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZFYP08048 801 aaPredicted RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 METTL24Q5JXM2 366 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 OFD1O75665 1012 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 AKAP4Q5JQC9 854 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PLCG2P16885 1265 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 KINO60870 393 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 CUL5Q93034 780 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 ARGLU1Q9NWB6 273 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 LMTK3Q96Q04 1460 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PLIN1O60240 522 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 TDO2P48775 406 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 DUSP27Q5VZP5 1158 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 SLKQ9H2G2 1235 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 SAMD9Q5K651 1589 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 NPC1L1Q9UHC9 1359 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 NF2P35240 595 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RBM5P52756 815 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 CWC25Q9NXE8 425 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.83
LINC00641-201ENST00000555379 SEC63Q9UGP8 760 aaKnown RBP9.9□□□□□ -0.83
LINC00641-201ENST00000555379 CFAP45Q9UL16 551 aa9.9□□□□□ -0.83
LINC00641-201ENST00000555379 ACEP12821 1306 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms