RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 RAD50Q92878 1312 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 TTC22Q5TAA0 569 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 BLOC1S2Q6QNY1 142 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 HDXQ7Z353 690 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 TMX3Q96JJ7 454 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 PCDHB15Q9Y5E8 787 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 IMMTQ16891 758 aaKnown RBP7.48□□□□□ -1.21
PCNX1-207ENST00000554691 SPATS2Q86XZ4 545 aaKnown RBP7.48□□□□□ -1.21
PCNX1-207ENST00000554691 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
PCNX1-207ENST00000554691 NPHP3Q7Z494 1330 aa7.48□□□□□ -1.21
PCNX1-207ENST00000554691 TDRD9Q8NDG6 1382 aaKnown RBP7.48□□□□□ -1.21
PCNX1-207ENST00000554691 OPA1O60313 960 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 ME1P48163 572 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 KIF4BQ2VIQ3 1234 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 EHBP1Q8NDI1 1231 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 ZSCAN16Q9H4T2 348 aaPredicted RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 BCCIPQ9P287 314 aaKnown RBP eCLIP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CPSF2Q9P2I0 782 aaKnown RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CASTP20810 708 aaKnown RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 PIP4K2BP78356 416 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 AKAP17AQ02040 695 aaKnown RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CKAP4Q07065 602 aaKnown RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 ZSCAN26Q16670 478 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 MICALL1Q8N3F8 863 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 RASSF8Q8NHQ8 419 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 UBTFL1P0CB47 393 aaPredicted RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CFAP100Q494V2 611 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CENPHQ9H3R5 247 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 VGLL3A8MV65 326 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 KIF1CO43896 1103 aaKnown RBP7.47□□□□□ -1.21
PCNX1-207ENST00000554691 FCHSD2O94868 740 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 SETSIPP0DME0 302 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 HSPA4P34932 840 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 TRDNQ13061 729 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
PCNX1-207ENST00000554691 CFAP43Q8NDM7 1665 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.21
PCNX1-207ENST00000554691 SEC24BO95487 1268 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 TRIM27P14373 513 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 G3BP1Q13283 466 aaKnown RBP eCLIP7.46□□□□□ -1.21
PCNX1-207ENST00000554691 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 CCDC181Q5TID7 509 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 SSH1Q8WYL5 1049 aa7.46□□□□□ -1.21
PCNX1-207ENST00000554691 GBP2P32456 591 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-207ENST00000554691 ARFGAP2Q8N6H7 521 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
PCNX1-207ENST00000554691 RSRC1Q96IZ7 334 aaKnown RBP7.46□□□□□ -1.22
PCNX1-207ENST00000554691 ASXL1Q8IXJ9 1541 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 POLR3AO14802 1390 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-207ENST00000554691 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 ARHGAP25P42331 645 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.222e-6■■■■□ 24.2
PCNX1-207ENST00000554691 TYRO3Q06418 890 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 ATL3Q6DD88 541 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 CLEC17AQ6ZS10 378 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 JPH4Q96JJ6 628 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 ZNF830Q96NB3 372 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-207ENST00000554691 FMNL2Q96PY5 1086 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 YY1AP1Q9H869 796 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 BIVM-ERCC5R4GMW8 1640 aa7.46□□□□□ -1.22
PCNX1-207ENST00000554691 UHRF1BP1Q6BDS2 1440 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 OTUD6BQ8N6M0 293 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
PCNX1-207ENST00000554691 MPHOSPH8Q99549 860 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 TRMT1Q9NXH9 659 aaKnown RBP7.45□□□□□ -1.22
PCNX1-207ENST00000554691 TMPOP42166 694 aaKnown RBP7.45□□□□□ -1.22
PCNX1-207ENST00000554691 GIGYF2Q6Y7W6 1299 aaKnown RBP7.45□□□□□ -1.22
PCNX1-207ENST00000554691 C9orf84Q5VXU9 1444 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 CTAGE15A4D2H0 777 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 F13A1P00488 732 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 CTAGE8P0CG41 777 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 XBP1P17861 261 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 PTGS1P23219 599 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 BRD3Q15059 726 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 TERF2Q15554 542 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 ICE2Q659A1 982 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 CTAGE6Q86UF2 777 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 GAS2L3Q86XJ1 694 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 CTAGE4Q8IX94 777 aa7.45□□□□□ -1.22
PCNX1-207ENST00000554691 MYO1BO43795 1136 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 GNG11P61952 73 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 COG3Q96JB2 828 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 TROQ12816 1431 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-207ENST00000554691 TCOF1Q13428 1488 aaKnown RBP7.44□□□□□ -1.22
PCNX1-207ENST00000554691 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 IGSF3O75054 1194 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 DDX58O95786 925 aaKnown RBP7.44□□□□□ -1.22
PCNX1-207ENST00000554691 CCDC172P0C7W6 258 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 SH3BGRP55822 239 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-207ENST00000554691 SPECC1LQ69YQ0 1117 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 LMOD2Q6P5Q4 547 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 GIMAP6Q6P9H5 292 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 TMC6Q7Z403 805 aa7.44□□□□□ -1.22
PCNX1-207ENST00000554691 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms