RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 APBB1O00213 710 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 CYP27B1O15528 508 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 STARD3NLO95772 234 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 USPL1Q5W0Q7 1092 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 NBPF5PQ86XG9 351 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-205ENST00000554081 NUTM1Q86Y26 1132 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 RNF166Q96A37 237 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-205ENST00000554081 TTC21AQ8NDW8 1320 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 ASXL1Q8IXJ9 1541 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 PHLPP1O60346 1717 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 ATP5J2-PTCD1G3V325 749 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 PRKG1Q13976 671 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF827Q17R98 1081 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 TAF7LQ5H9L4 462 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 COL23A1Q86Y22 540 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-205ENST00000554081 CDCA7Q9BWT1 371 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-205ENST00000554081 RNF181Q9P0P0 153 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 NKTRP30414 1462 aaKnown RBP3.26□□□□□ -1.89
PRPF39-205ENST00000554081 IQSEC2Q5JU85 1478 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 ARHGAP23Q9P227 1491 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 KIF7Q2M1P5 1343 aa3.26□□□□□ -1.89
PRPF39-205ENST00000554081 PLXNC1O60486 1568 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 CLTCL1P53675 1640 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF316A6NFI3 1004 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 KCNQ3O43525 872 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 GOLGA2Q08379 1002 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 FRAT1Q92837 279 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 SMARCC1Q92922 1105 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 SETDB2Q96T68 719 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 NIP7Q9Y221 180 aaKnown RBP eCLIP3.25□□□□□ -1.896e-7■■■■■ 31.5
PRPF39-205ENST00000554081 MED14O60244 1454 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 NEURL4Q96JN8 1562 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 MYO9BQ13459 2157 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 C6orf229H3BNL8 230 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 APAF1O14727 1248 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 RIMBP2O15034 1052 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 ZBTB22O15209 634 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 C21orf2O43822 256 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 GIGYF1O75420 1035 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 RGS20O76081 388 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 TTLL12Q14166 644 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 MTHFSDQ2M296 383 aaKnown RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 CAMKK2Q96RR4 588 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 TESK2Q96S53 571 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 MTFR1LQ9H019 292 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 JAG2Q9Y219 1238 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 MYO5BQ9ULV0 1848 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 PIK3C2GO75747 1445 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 USP6P35125 1406 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 BLMP54132 1417 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 SPATA31E1Q6ZUB1 1445 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 E9PCH4 1651 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 GCC2Q8IWJ2 1684 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 BCL9LQ86UU0 1499 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 PRAMEF22A3QJZ6 481 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 HSP90AB1P08238 724 aaKnown RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 ZEB1P37275 1124 aaPredicted RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 KRT24Q2M2I5 525 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 RIC3Q7Z5B4 369 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 PROM2Q8N271 834 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 SCAF8Q9UPN6 1271 aaKnown RBP3.25□□□□□ -1.89
PRPF39-205ENST00000554081 ZBTB1Q9Y2K1 713 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 VWDEQ8N2E2 1590 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 PCDH11XQ9BZA7 1347 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 PCDH11YQ9BZA8 1340 aa3.25□□□□□ -1.89
PRPF39-205ENST00000554081 SSH2Q76I76 1423 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 PRAG1Q86YV5 1406 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 SLIT1O75093 1534 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 GNAT3A8MTJ3 354 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 CRKLP46109 303 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 DZIP3Q86Y13 1208 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 ARHGEF1Q92888 912 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF496Q96IT1 587 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 PHACTR3Q96KR7 559 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 THRAP3Q9Y2W1 955 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 PALLDQ8WX93 1383 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 UBR1Q8IWV7 1749 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 H0YIN7 160 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 KCNJ4P48050 445 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 RBM5P52756 815 aaKnown RBP eCLIP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 MKRN4PQ13434 485 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 FKBP8Q14318 412 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 KIF6Q6ZMV9 814 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 RPGRQ92834 1020 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 CLUAP1Q96AJ1 413 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 CCDC87Q9NVE4 849 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 ISY1Q9ULR0 285 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 NSFL1CQ9UNZ2 370 aaKnown RBP3.24□□□□□ -1.89
PRPF39-205ENST00000554081 USP16Q9Y5T5 823 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 TET3O43151 1660 aa3.24□□□□□ -1.89
PRPF39-205ENST00000554081 F8W031 263 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 HCLS1P14317 486 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 PHKG2P15735 406 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 HNRNPUQ00839 825 aaKnown RBP eCLIP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 MKRN3Q13064 507 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ERFEQ4G0M1 354 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 C2CD5Q86YS7 1000 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 TRMT112Q9UI30 125 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 SBNO1A3KN83 1393 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 OVOS2A0A0G2JMS6 1433 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms