RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 SMARCC1Q92922 1105 aaPredicted RBP26.82■■□□□ 1.88
SDR39U1-204ENST00000553343 SYTL4Q96C24 671 aaPredicted RBP26.82■■□□□ 1.88
SDR39U1-204ENST00000553343 ZNF521Q96K83 1311 aa26.82■■□□□ 1.88
SDR39U1-204ENST00000553343 KAT6BQ8WYB5 2073 aa26.81■■□□□ 1.88
SDR39U1-204ENST00000553343 HMGB2P26583 209 aaKnown RBP26.81■■□□□ 1.88
SDR39U1-204ENST00000553343 DCTN1Q14203 1278 aa26.81■■□□□ 1.88
SDR39U1-204ENST00000553343 NFATC2IPQ8NCF5 419 aa26.81■■□□□ 1.88
SDR39U1-204ENST00000553343 PIGBQ92521 554 aa26.81■■□□□ 1.88
SDR39U1-204ENST00000553343 ZNF831Q5JPB2 1677 aa26.8■■□□□ 1.88
SDR39U1-204ENST00000553343 KDM3BQ7LBC6 1761 aa26.8■■□□□ 1.88
SDR39U1-204ENST00000553343 KCNQ2O43526 872 aa26.79■■□□□ 1.88
SDR39U1-204ENST00000553343 TRIM37O94972 964 aa26.79■■□□□ 1.88
SDR39U1-204ENST00000553343 IFT57Q9NWB7 429 aa26.79■■□□□ 1.88
SDR39U1-204ENST00000553343 UBR2Q8IWV8 1755 aa26.79■■□□□ 1.88
SDR39U1-204ENST00000553343 PLSCR1O15162 318 aa26.78■■□□□ 1.88
SDR39U1-204ENST00000553343 SF3B2Q13435 895 aaKnown RBP26.78■■□□□ 1.88
SDR39U1-204ENST00000553343 CFAP44Q96MT7 982 aa26.78■■□□□ 1.88
SDR39U1-204ENST00000553343 CICQ96RK0 1608 aaPredicted RBP26.77■■□□□ 1.88
SDR39U1-204ENST00000553343 ZBED9Q6R2W3 1325 aa26.77■■□□□ 1.88
SDR39U1-204ENST00000553343 GNAI1P63096 354 aa26.77■■□□□ 1.88
SDR39U1-204ENST00000553343 HNRNPUQ00839 825 aaKnown RBP eCLIP26.77■■□□□ 1.88
SDR39U1-204ENST00000553343 ILDR2Q71H61 639 aa26.77■■□□□ 1.88
SDR39U1-204ENST00000553343 LY75O60449 1722 aa26.76■■□□□ 1.88
SDR39U1-204ENST00000553343 BTBD11A6QL63 1104 aa26.76■■□□□ 1.87
SDR39U1-204ENST00000553343 ZNF853P0CG23 659 aa26.75■■□□□ 1.87
SDR39U1-204ENST00000553343 THUMPD2Q9BTF0 503 aaKnown RBP26.75■■□□□ 1.87
SDR39U1-204ENST00000553343 EP400Q96L91 3159 aa26.75■■□□□ 1.87
SDR39U1-204ENST00000553343 CHL1O00533 1208 aa26.74■■□□□ 1.87
SDR39U1-204ENST00000553343 TTC5Q8N0Z6 440 aa26.74■■□□□ 1.87
SDR39U1-204ENST00000553343 ZNF790Q6PG37 636 aa26.73■■□□□ 1.87
SDR39U1-204ENST00000553343 PALLDQ8WX93 1383 aa26.72■■□□□ 1.87
SDR39U1-204ENST00000553343 BAG6P46379 1132 aa26.72■■□□□ 1.87
SDR39U1-204ENST00000553343 ATG3Q9NT62 314 aa26.72■■□□□ 1.87
SDR39U1-204ENST00000553343 KCPQ6ZWJ8 1503 aa26.71■■□□□ 1.87
SDR39U1-204ENST00000553343 GOLGA2Q08379 1002 aa26.71■■□□□ 1.87
SDR39U1-204ENST00000553343 TSPYL4Q9UJ04 414 aa26.71■■□□□ 1.87
SDR39U1-204ENST00000553343 APBA3O96018 575 aa26.7■■□□□ 1.86
SDR39U1-204ENST00000553343 VSIG10Q8N0Z9 540 aa26.7■■□□□ 1.86
SDR39U1-204ENST00000553343 MYH16Q9H6N6 1097 aa26.7■■□□□ 1.86
SDR39U1-204ENST00000553343 SALL2Q9Y467 1007 aaPredicted RBP26.7■■□□□ 1.86
SDR39U1-204ENST00000553343 E9PSI1 815 aa26.69■■□□□ 1.86
SDR39U1-204ENST00000553343 SLC27A3Q5K4L6 730 aa26.69■■□□□ 1.86
SDR39U1-204ENST00000553343 UPF1Q92900 1129 aaKnown RBP eCLIP26.69■■□□□ 1.86
SDR39U1-204ENST00000553343 ASAP1Q9ULH1 1129 aa26.69■■□□□ 1.86
SDR39U1-204ENST00000553343 PTF1AQ7RTS3 328 aa26.68■■□□□ 1.86
SDR39U1-204ENST00000553343 FMNL2Q96PY5 1086 aa26.68■■□□□ 1.86
SDR39U1-204ENST00000553343 SOS1Q07889 1333 aaPredicted RBP26.67■■□□□ 1.86
SDR39U1-204ENST00000553343 HEG1Q9ULI3 1381 aa26.66■■□□□ 1.86
SDR39U1-204ENST00000553343 MBIPQ9NS73 344 aa26.65■■□□□ 1.86
SDR39U1-204ENST00000553343 RREB1Q92766 1687 aa26.65■■□□□ 1.86
SDR39U1-204ENST00000553343 LOC102724428A0A0B4J2F2 783 aa26.64■■□□□ 1.86
SDR39U1-204ENST00000553343 SIK1P57059 783 aa26.64■■□□□ 1.86
SDR39U1-204ENST00000553343 SLC39A6Q13433 755 aa26.64■■□□□ 1.86
SDR39U1-204ENST00000553343 TEX13AQ9BXU3 409 aaPredicted RBP26.64■■□□□ 1.86
SDR39U1-204ENST00000553343 HOXB7P09629 217 aa26.63■■□□□ 1.85
SDR39U1-204ENST00000553343 EIF4A1P60842 406 aaKnown RBP26.63■■□□□ 1.85
SDR39U1-204ENST00000553343 CHMP4AQ9BY43 222 aa26.63■■□□□ 1.85
SDR39U1-204ENST00000553343 LAS1LQ9Y4W2 734 aaKnown RBP26.63■■□□□ 1.85
SDR39U1-204ENST00000553343 C5P01031 1676 aa26.63■■□□□ 1.85
SDR39U1-204ENST00000553343 LAMB4A4D0S4 1761 aa26.62■■□□□ 1.85
SDR39U1-204ENST00000553343 SLFN5Q08AF3 891 aa26.62■■□□□ 1.85
SDR39U1-204ENST00000553343 CAMKK2Q96RR4 588 aa26.62■■□□□ 1.85
SDR39U1-204ENST00000553343 SENP3-EIF4A1A0A087X0R7 540 aa26.61■■□□□ 1.85
SDR39U1-204ENST00000553343 ZNF496Q96IT1 587 aaPredicted RBP26.61■■□□□ 1.85
SDR39U1-204ENST00000553343 TJP1Q07157 1748 aa26.61■■□□□ 1.85
SDR39U1-204ENST00000553343 FANCIQ9NVI1 1328 aa26.61■■□□□ 1.85
SDR39U1-204ENST00000553343 TRMT2AQ8IZ69 625 aaKnown RBP26.6■■□□□ 1.85
SDR39U1-204ENST00000553343 MIS18AQ9NYP9 233 aa26.6■■□□□ 1.85
SDR39U1-204ENST00000553343 CCNL1Q9UK58 526 aaPredicted RBP26.6■■□□□ 1.85
SDR39U1-204ENST00000553343 COL5A3P25940 1745 aaPredicted RBP26.59■■□□□ 1.85
SDR39U1-204ENST00000553343 SNRPA1P09661 255 aaKnown RBP26.59■■□□□ 1.85
SDR39U1-204ENST00000553343 TXNRD1Q16881 649 aa26.59■■□□□ 1.85
SDR39U1-204ENST00000553343 RBM42Q9BTD8 480 aaKnown RBP26.59■■□□□ 1.85
SDR39U1-204ENST00000553343 TAF1LQ8IZX4 1826 aa26.59■■□□□ 1.85
SDR39U1-204ENST00000553343 PTCD1O75127 700 aaKnown RBP26.58■■□□□ 1.85
SDR39U1-204ENST00000553343 KCNQ3O43525 872 aa26.57■■□□□ 1.84
SDR39U1-204ENST00000553343 ATP6V1AP38606 617 aa26.57■■□□□ 1.84
SDR39U1-204ENST00000553343 GIGYF1O75420 1035 aaPredicted RBP26.56■■□□□ 1.84
SDR39U1-204ENST00000553343 SPINK5Q9NQ38 1064 aaPredicted RBP26.56■■□□□ 1.84
SDR39U1-204ENST00000553343 EN1Q05925 392 aaPredicted RBP26.55■■□□□ 1.84
SDR39U1-204ENST00000553343 NUP188Q5SRE5 1749 aa26.55■■□□□ 1.84
SDR39U1-204ENST00000553343 CT47B1P0C2W7 299 aaPredicted RBP26.54■■□□□ 1.84
SDR39U1-204ENST00000553343 TSR2Q969E8 191 aaKnown RBP26.54■■□□□ 1.84
SDR39U1-204ENST00000553343 SLC4A9Q96Q91 983 aa26.54■■□□□ 1.84
SDR39U1-204ENST00000553343 STARD3NLO95772 234 aa26.53■■□□□ 1.84
SDR39U1-204ENST00000553343 DUSP27Q5VZP5 1158 aa26.53■■□□□ 1.84
SDR39U1-204ENST00000553343 PROM2Q8N271 834 aa26.53■■□□□ 1.84
SDR39U1-204ENST00000553343 ERBB4Q15303 1308 aa26.53■■□□□ 1.84
SDR39U1-204ENST00000553343 CNTNAP4Q9C0A0 1308 aa26.53■■□□□ 1.84
SDR39U1-204ENST00000553343 C4BP0C0L5 1744 aa26.52■■□□□ 1.84
SDR39U1-204ENST00000553343 EZH2Q15910 746 aaKnown RBP26.52■■□□□ 1.84
SDR39U1-204ENST00000553343 ZNF428Q96B54 188 aa26.52■■□□□ 1.84
SDR39U1-204ENST00000553343 RC3H1Q5TC82 1133 aaKnown RBP26.51■■□□□ 1.83
SDR39U1-204ENST00000553343 DEFB132Q7Z7B7 95 aa26.51■■□□□ 1.83
SDR39U1-204ENST00000553343 SOCS7O14512 581 aa26.5■■□□□ 1.83
SDR39U1-204ENST00000553343 CDCA7LQ96GN5 454 aa26.5■■□□□ 1.83
SDR39U1-204ENST00000553343 LRRC4BQ9NT99 713 aa26.5■■□□□ 1.83
SDR39U1-204ENST00000553343 ITPK1Q13572 414 aa26.49■■□□□ 1.83
SDR39U1-204ENST00000553343 CYP19A1P11511 503 aaPredicted RBP26.48■■□□□ 1.83
SDR39U1-204ENST00000553343 TWISTNBQ3B726 338 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms