RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 PDCL2Q8N4E4 241 aa11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 SRCIN1Q9C0H9 1055 aa11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 ATP7AQ04656 1500 aa11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 CEBPZQ03701 1054 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-214ENST00000552674 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 STX6O43752 255 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 NPHP1O15259 732 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 FOXO3O43524 673 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 IL13P35225 146 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 WASLO00401 505 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 NRDCO43847 1150 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 ZNF500O60304 480 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 DDIT3P35638 169 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 FLIIQ13045 1269 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 TPD52L1Q16890 204 aaPredicted RBP11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 PDRG1Q9NUG6 133 aa11.32□□□□□ -0.6
SMARCC2-214ENST00000552674 CPA1P15085 419 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 TEFQ10587 303 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 CHMLP26374 656 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 NLRP6P59044 892 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 PLXNC1O60486 1568 aa11.31□□□□□ -0.6
SMARCC2-214ENST00000552674 IGSF3O75054 1194 aa11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 KRT85P78386 507 aa11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 UBE2HP62256 183 aa11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 MYOM2P54296 1465 aa11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 C16orf45Q96MC5 204 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
SMARCC2-214ENST00000552674 NPATQ14207 1427 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 BRD1O95696 1058 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 TPM3P06753 285 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 GJB2P29033 226 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 HSP90AB4PQ58FF6 505 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 TERF1P54274 439 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 RNF20Q5VTR2 975 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 FSD1Q9BTV5 496 aa11.29□□□□□ -0.6
SMARCC2-214ENST00000552674 ABCC1P33527 1531 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 MAP3K4Q9Y6R4 1608 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 RIMS2Q9UQ26 1411 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
SMARCC2-214ENST00000552674 PNMA6EA0A0J9YXQ4 647 aa11.27□□□□□ -0.6
SMARCC2-214ENST00000552674 ANAPC15P60006 121 aa11.27□□□□□ -0.6
SMARCC2-214ENST00000552674 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.6
SMARCC2-214ENST00000552674 SPATA32Q96LK8 384 aa11.27□□□□□ -0.6
SMARCC2-214ENST00000552674 SIL1Q9H173 461 aa11.27□□□□□ -0.6
SMARCC2-214ENST00000552674 SYT1P21579 422 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 AK2P54819 239 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 RTL1A6NKG5 1358 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 IQSEC2Q5JU85 1478 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 PDCP20941 246 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 KIF1BPQ96EK5 621 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 AK9Q5TCS8 1911 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 ZFYVE9O95405 1425 aa11.27□□□□□ -0.61
SMARCC2-214ENST00000552674 ANXA1P04083 346 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 SPHKAPQ2M3C7 1700 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 YTHDC2Q9H6S0 1430 aaKnown RBP11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 CHL1O00533 1208 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 F13A1P00488 732 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 AACSQ86V21 672 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
SMARCC2-214ENST00000552674 KDM4AO75164 1064 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 PSMA5P28066 241 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 BLOC1S2Q6QNY1 142 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 ZCCHC11Q5TAX3 1644 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms