RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 MARCH10Q8NA82 808 aaPredicted RBP10.54□□□□□ -0.72
CBX5-205ENST00000552562 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
CBX5-205ENST00000552562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■□□□ 14.2
CBX5-205ENST00000552562 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
CBX5-205ENST00000552562 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
CBX5-205ENST00000552562 PHKG2P15735 406 aa10.53□□□□□ -0.72
CBX5-205ENST00000552562 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
CBX5-205ENST00000552562 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
CBX5-205ENST00000552562 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
CBX5-205ENST00000552562 LRRC37A3O60309 1634 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 APAF1O14727 1248 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
CBX5-205ENST00000552562 NEUROD2Q15784 382 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 IFNL2Q8IZJ0 200 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
CBX5-205ENST00000552562 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
CBX5-205ENST00000552562 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
CBX5-205ENST00000552562 MPRIPQ6WCQ1 1025 aa10.51□□□□□ -0.73
CBX5-205ENST00000552562 PLEKHG2Q9H7P9 1386 aa10.51□□□□□ -0.73
CBX5-205ENST00000552562 RIPK4P57078 832 aa10.5□□□□□ -0.73
CBX5-205ENST00000552562 AKAP4Q5JQC9 854 aa10.5□□□□□ -0.73
CBX5-205ENST00000552562 ILDR2Q71H61 639 aa10.5□□□□□ -0.73
CBX5-205ENST00000552562 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
CBX5-205ENST00000552562 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
CBX5-205ENST00000552562 PARP4Q9UKK3 1724 aaKnown RBP10.5□□□□□ -0.73
CBX5-205ENST00000552562 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 SLC39A7Q92504 469 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 LGR6Q9HBX8 967 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 MAP3K5Q99683 1374 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
CBX5-205ENST00000552562 HSP90AB1P08238 724 aaKnown RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 C7P10643 843 aa10.48□□□□□ -0.73
CBX5-205ENST00000552562 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
CBX5-205ENST00000552562 MCM10Q7L590 875 aa10.48□□□□□ -0.73
CBX5-205ENST00000552562 IL17REQ8NFR9 667 aa10.48□□□□□ -0.73
CBX5-205ENST00000552562 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 SYTL4Q96C24 671 aaPredicted RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 KDM6AO15550 1401 aaPredicted RBP10.48□□□□□ -0.73
CBX5-205ENST00000552562 RNMTO43148 476 aaKnown RBP10.47□□□□□ -0.73
CBX5-205ENST00000552562 KCNQ2O43526 872 aa10.47□□□□□ -0.73
CBX5-205ENST00000552562 PTF1AQ7RTS3 328 aa10.47□□□□□ -0.73
CBX5-205ENST00000552562 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
CBX5-205ENST00000552562 TRIM35Q9UPQ4 493 aa10.47□□□□□ -0.73
CBX5-205ENST00000552562 PKD1L3Q7Z443 1732 aa10.47□□□□□ -0.73
CBX5-205ENST00000552562 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.73
CBX5-205ENST00000552562 KIF12Q96FN5 646 aa10.46□□□□□ -0.73
CBX5-205ENST00000552562 SHANK3Q9BYB0 1731 aa10.45□□□□□ -0.74
CBX5-205ENST00000552562 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
CBX5-205ENST00000552562 TRIM37O94972 964 aa10.45□□□□□ -0.74
CBX5-205ENST00000552562 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
CBX5-205ENST00000552562 CABP4P57796 275 aa10.45□□□□□ -0.74
CBX5-205ENST00000552562 LMOD3Q0VAK6 560 aa10.45□□□□□ -0.74
CBX5-205ENST00000552562 ERVV-2B6SEH9 535 aa10.44□□□□□ -0.74
CBX5-205ENST00000552562 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
CBX5-205ENST00000552562 TEFQ10587 303 aa10.44□□□□□ -0.74
CBX5-205ENST00000552562 NFATC2IPQ8NCF5 419 aa10.44□□□□□ -0.74
CBX5-205ENST00000552562 TMOD3Q9NYL9 352 aa10.44□□□□□ -0.74
CBX5-205ENST00000552562 BCL9O00512 1426 aa10.43□□□□□ -0.74
CBX5-205ENST00000552562 CEMIPQ8WUJ3 1361 aa10.43□□□□□ -0.74
CBX5-205ENST00000552562 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
CBX5-205ENST00000552562 PIGBQ92521 554 aa10.43□□□□□ -0.74
CBX5-205ENST00000552562 SLC52A2Q9HAB3 445 aa10.43□□□□□ -0.74
CBX5-205ENST00000552562 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
CBX5-205ENST00000552562 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
CBX5-205ENST00000552562 CCDC27Q2M243 656 aa10.42□□□□□ -0.74
CBX5-205ENST00000552562 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
CBX5-205ENST00000552562 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
CBX5-205ENST00000552562 MIS18AQ9NYP9 233 aa10.42□□□□□ -0.74
CBX5-205ENST00000552562 LAS1LQ9Y4W2 734 aaKnown RBP10.42□□□□□ -0.74
CBX5-205ENST00000552562 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
CBX5-205ENST00000552562 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
CBX5-205ENST00000552562 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
CBX5-205ENST00000552562 ASAP1Q9ULH1 1129 aa10.41□□□□□ -0.74
CBX5-205ENST00000552562 KCNQ3O43525 872 aa10.4□□□□□ -0.74
CBX5-205ENST00000552562 APBA3O96018 575 aa10.4□□□□□ -0.74
CBX5-205ENST00000552562 TAF7Q15545 349 aaPredicted RBP10.4□□□□□ -0.74
CBX5-205ENST00000552562 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
CBX5-205ENST00000552562 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
CBX5-205ENST00000552562 MRC1P22897 1456 aa10.39□□□□□ -0.75
CBX5-205ENST00000552562 NGEFQ8N5V2 710 aa10.39□□□□□ -0.75
CBX5-205ENST00000552562 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
CBX5-205ENST00000552562 DOT1LQ8TEK3 1739 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 MAP3K13O43283 966 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
CBX5-205ENST00000552562 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
CBX5-205ENST00000552562 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
CBX5-205ENST00000552562 DEFB132Q7Z7B7 95 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 WDR63Q8IWG1 891 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
CBX5-205ENST00000552562 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
CBX5-205ENST00000552562 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
CBX5-205ENST00000552562 CHL1O00533 1208 aa10.37□□□□□ -0.75
CBX5-205ENST00000552562 KCNQ4P56696 695 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms