RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 CCDC146Q8IYE0 955 aa23.33■■□□□ 1.33
CDK4-210ENST00000551888 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
CDK4-210ENST00000551888 ZNF831Q5JPB2 1677 aa23.32■■□□□ 1.32
CDK4-210ENST00000551888 SLC52A2Q9HAB3 445 aa23.32■■□□□ 1.32
CDK4-210ENST00000551888 MAPK8IP3Q9UPT6 1336 aa23.31■■□□□ 1.32
CDK4-210ENST00000551888 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
CDK4-210ENST00000551888 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
CDK4-210ENST00000551888 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
CDK4-210ENST00000551888 TJP1Q07157 1748 aa23.3■■□□□ 1.32
CDK4-210ENST00000551888 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
CDK4-210ENST00000551888 PSDA5PKW4 1024 aaPredicted RBP23.29■■□□□ 1.32
CDK4-210ENST00000551888 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
CDK4-210ENST00000551888 QSER1Q2KHR3 1735 aa23.29■■□□□ 1.32
CDK4-210ENST00000551888 SLC27A3Q5K4L6 730 aa23.29■■□□□ 1.32
CDK4-210ENST00000551888 MCM10Q7L590 875 aa23.29■■□□□ 1.32
CDK4-210ENST00000551888 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
CDK4-210ENST00000551888 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
CDK4-210ENST00000551888 C4BP0C0L5 1744 aa23.28■■□□□ 1.32
CDK4-210ENST00000551888 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
CDK4-210ENST00000551888 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
CDK4-210ENST00000551888 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
CDK4-210ENST00000551888 NEFMP07197 916 aa23.27■■□□□ 1.32
CDK4-210ENST00000551888 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
CDK4-210ENST00000551888 ZNF827Q17R98 1081 aa23.27■■□□□ 1.32
CDK4-210ENST00000551888 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
CDK4-210ENST00000551888 SLC4A9Q96Q91 983 aa23.27■■□□□ 1.32
CDK4-210ENST00000551888 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
CDK4-210ENST00000551888 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
CDK4-210ENST00000551888 SIK1P57059 783 aa23.25■■□□□ 1.31
CDK4-210ENST00000551888 SLC39A6Q13433 755 aa23.25■■□□□ 1.31
CDK4-210ENST00000551888 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
CDK4-210ENST00000551888 NBPF14Q5TI25 921 aa23.24■■□□□ 1.31
CDK4-210ENST00000551888 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
CDK4-210ENST00000551888 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
CDK4-210ENST00000551888 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
CDK4-210ENST00000551888 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
CDK4-210ENST00000551888 ITPK1Q13572 414 aa23.23■■□□□ 1.31
CDK4-210ENST00000551888 AKT1S1Q96B36 256 aa23.23■■□□□ 1.31
CDK4-210ENST00000551888 THUMPD2Q9BTF0 503 aaKnown RBP23.23■■□□□ 1.31
CDK4-210ENST00000551888 TEFQ10587 303 aa23.22■■□□□ 1.31
CDK4-210ENST00000551888 SLC15A2Q16348 729 aa23.22■■□□□ 1.31
CDK4-210ENST00000551888 RTF1Q92541 710 aaKnown RBP23.22■■□□□ 1.31
CDK4-210ENST00000551888 MYH14Q7Z406 1995 aaKnown RBP23.21■■□□□ 1.31
CDK4-210ENST00000551888 RIPK4P57078 832 aa23.21■■□□□ 1.31
CDK4-210ENST00000551888 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
CDK4-210ENST00000551888 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
CDK4-210ENST00000551888 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
CDK4-210ENST00000551888 RBM42Q9BTD8 480 aaKnown RBP23.2■■□□□ 1.3
CDK4-210ENST00000551888 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
CDK4-210ENST00000551888 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
CDK4-210ENST00000551888 DIEXFQ68CQ4 756 aaKnown RBP23.19■■□□□ 1.3
CDK4-210ENST00000551888 KCNQ3O43525 872 aa23.18■■□□□ 1.3
CDK4-210ENST00000551888 NEUROD2Q15784 382 aa23.18■■□□□ 1.3
CDK4-210ENST00000551888 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
CDK4-210ENST00000551888 APAF1O14727 1248 aa23.16■■□□□ 1.3
CDK4-210ENST00000551888 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
CDK4-210ENST00000551888 AMIGO3Q86WK7 504 aa23.16■■□□□ 1.3
CDK4-210ENST00000551888 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
CDK4-210ENST00000551888 PNPLA7Q6ZV29 1317 aa23.14■■□□□ 1.3
CDK4-210ENST00000551888 SENP3-EIF4A1A0A087X0R7 540 aa23.14■■□□□ 1.29
CDK4-210ENST00000551888 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
CDK4-210ENST00000551888 LRP5O75197 1615 aa23.13■■□□□ 1.29
CDK4-210ENST00000551888 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
CDK4-210ENST00000551888 C4AP0C0L4 1744 aa23.12■■□□□ 1.29
CDK4-210ENST00000551888 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
CDK4-210ENST00000551888 SMIM5Q71RC9 77 aa23.12■■□□□ 1.29
CDK4-210ENST00000551888 DNAJC10Q8IXB1 793 aa23.12■■□□□ 1.29
CDK4-210ENST00000551888 TTC5Q8N0Z6 440 aa23.12■■□□□ 1.29
CDK4-210ENST00000551888 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 LAMB4A4D0S4 1761 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 HEG1Q9ULI3 1381 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
CDK4-210ENST00000551888 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
CDK4-210ENST00000551888 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
CDK4-210ENST00000551888 MIER1Q8N108 512 aa23.09■■□□□ 1.29
CDK4-210ENST00000551888 AK7Q96M32 723 aa23.09■■□□□ 1.29
CDK4-210ENST00000551888 VSIG10Q8N0Z9 540 aa23.08■■□□□ 1.29
CDK4-210ENST00000551888 GNPATO15228 680 aa23.07■■□□□ 1.28
CDK4-210ENST00000551888 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
CDK4-210ENST00000551888 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
CDK4-210ENST00000551888 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
CDK4-210ENST00000551888 CYP19A1P11511 503 aaPredicted RBP23.06■■□□□ 1.28
CDK4-210ENST00000551888 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
CDK4-210ENST00000551888 SRCAPQ6ZRS2 3230 aa23.05■■□□□ 1.28
CDK4-210ENST00000551888 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
CDK4-210ENST00000551888 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
CDK4-210ENST00000551888 PHF14O94880 888 aa23.04■■□□□ 1.28
CDK4-210ENST00000551888 HMGB2P26583 209 aaKnown RBP23.04■■□□□ 1.28
CDK4-210ENST00000551888 INTS5Q6P9B9 1019 aaKnown RBP23.04■■□□□ 1.28
CDK4-210ENST00000551888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
CDK4-210ENST00000551888 SSFA2P28290 1259 aa23.02■■□□□ 1.28
CDK4-210ENST00000551888 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
CDK4-210ENST00000551888 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
CDK4-210ENST00000551888 ZBTB1Q9Y2K1 713 aa23.02■■□□□ 1.28
CDK4-210ENST00000551888 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
CDK4-210ENST00000551888 CHL1O00533 1208 aa23■■□□□ 1.27
CDK4-210ENST00000551888 RPS6KA4O75676 772 aa23■■□□□ 1.27
CDK4-210ENST00000551888 USP16Q9Y5T5 823 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms