RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 C4BP0C0L5 1744 aa15.79■□□□□ 0.12
RAB5C-204ENST00000547517 QSER1Q2KHR3 1735 aa15.79■□□□□ 0.12
RAB5C-204ENST00000547517 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
RAB5C-204ENST00000547517 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
RAB5C-204ENST00000547517 LGR6Q9HBX8 967 aa15.78■□□□□ 0.12
RAB5C-204ENST00000547517 TFCP2L1Q9NZI6 479 aa15.78■□□□□ 0.12
RAB5C-204ENST00000547517 NFATC2IPQ8NCF5 419 aa15.77■□□□□ 0.12
RAB5C-204ENST00000547517 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
RAB5C-204ENST00000547517 SLC52A2Q9HAB3 445 aa15.77■□□□□ 0.12
RAB5C-204ENST00000547517 PNPLA7Q6ZV29 1317 aa15.76■□□□□ 0.11
RAB5C-204ENST00000547517 FCHSD2O94868 740 aa15.76■□□□□ 0.11
RAB5C-204ENST00000547517 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
RAB5C-204ENST00000547517 SPON1Q9HCB6 807 aa15.76■□□□□ 0.11
RAB5C-204ENST00000547517 GNAT3A8MTJ3 354 aa15.75■□□□□ 0.11
RAB5C-204ENST00000547517 ATP6V1AP38606 617 aa15.75■□□□□ 0.11
RAB5C-204ENST00000547517 ITPK1Q13572 414 aa15.75■□□□□ 0.11
RAB5C-204ENST00000547517 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
RAB5C-204ENST00000547517 AK7Q96M32 723 aa15.75■□□□□ 0.11
RAB5C-204ENST00000547517 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
RAB5C-204ENST00000547517 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
RAB5C-204ENST00000547517 PTCD1O75127 700 aaKnown RBP15.73■□□□□ 0.11
RAB5C-204ENST00000547517 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
RAB5C-204ENST00000547517 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
RAB5C-204ENST00000547517 COL5A3P25940 1745 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-204ENST00000547517 TJP1Q07157 1748 aa15.72■□□□□ 0.11
RAB5C-204ENST00000547517 MSH5O43196 834 aa15.72■□□□□ 0.11
RAB5C-204ENST00000547517 NEFMP07197 916 aa15.72■□□□□ 0.11
RAB5C-204ENST00000547517 HMGB2P26583 209 aaKnown RBP15.72■□□□□ 0.11
RAB5C-204ENST00000547517 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
RAB5C-204ENST00000547517 PPP1R1BQ9UD71 204 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-204ENST00000547517 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 PHF14O94880 888 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 TEFQ10587 303 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
RAB5C-204ENST00000547517 SIPA1L3O60292 1781 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-204ENST00000547517 CICQ96RK0 1608 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-204ENST00000547517 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
RAB5C-204ENST00000547517 GNPATO15228 680 aa15.7■□□□□ 0.1
RAB5C-204ENST00000547517 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
RAB5C-204ENST00000547517 COL23A1Q86Y22 540 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-204ENST00000547517 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
RAB5C-204ENST00000547517 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
RAB5C-204ENST00000547517 PTGER2P43116 358 aa15.69■□□□□ 0.1
RAB5C-204ENST00000547517 SMIM5Q71RC9 77 aa15.69■□□□□ 0.1
RAB5C-204ENST00000547517 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
RAB5C-204ENST00000547517 UBR2Q8IWV8 1755 aa15.69■□□□□ 0.1
RAB5C-204ENST00000547517 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
RAB5C-204ENST00000547517 MCM10Q7L590 875 aa15.68■□□□□ 0.1
RAB5C-204ENST00000547517 SLC16A10Q8TF71 515 aa15.68■□□□□ 0.1
RAB5C-204ENST00000547517 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
RAB5C-204ENST00000547517 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
RAB5C-204ENST00000547517 DLG5Q8TDM6 1919 aa15.67■□□□□ 0.1
RAB5C-204ENST00000547517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
RAB5C-204ENST00000547517 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
RAB5C-204ENST00000547517 TTC5Q8N0Z6 440 aa15.67■□□□□ 0.1
RAB5C-204ENST00000547517 FLAD1Q8NFF5 587 aa15.67■□□□□ 0.1
RAB5C-204ENST00000547517 SSFA2P28290 1259 aa15.66■□□□□ 0.1
RAB5C-204ENST00000547517 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
RAB5C-204ENST00000547517 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
RAB5C-204ENST00000547517 COL24A1Q17RW2 1714 aa15.65■□□□□ 0.1
RAB5C-204ENST00000547517 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
RAB5C-204ENST00000547517 NFE2L2Q16236 605 aa15.65■□□□□ 0.1
RAB5C-204ENST00000547517 DNAJC10Q8IXB1 793 aa15.65■□□□□ 0.1
RAB5C-204ENST00000547517 CCDC146Q8IYE0 955 aa15.65■□□□□ 0.1
RAB5C-204ENST00000547517 BTBD11A6QL63 1104 aa15.64■□□□□ 0.09
RAB5C-204ENST00000547517 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
RAB5C-204ENST00000547517 POLD1P28340 1107 aa15.64■□□□□ 0.09
RAB5C-204ENST00000547517 ZNF790Q6PG37 636 aa15.64■□□□□ 0.09
RAB5C-204ENST00000547517 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
RAB5C-204ENST00000547517 MYH14Q7Z406 1995 aaKnown RBP15.64■□□□□ 0.09
RAB5C-204ENST00000547517 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
RAB5C-204ENST00000547517 ANP32CO43423 234 aa15.63■□□□□ 0.09
RAB5C-204ENST00000547517 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
RAB5C-204ENST00000547517 ZNF496Q96IT1 587 aaPredicted RBP15.62■□□□□ 0.09
RAB5C-204ENST00000547517 ARXQ96QS3 562 aa15.62■□□□□ 0.09
RAB5C-204ENST00000547517 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
RAB5C-204ENST00000547517 ADAMTS8Q9UP79 889 aa15.62■□□□□ 0.09
RAB5C-204ENST00000547517 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
RAB5C-204ENST00000547517 KCNQ3O43525 872 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 RPS6KA4O75676 772 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 IFFO2Q5TF58 517 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 FMNL2Q96PY5 1086 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
RAB5C-204ENST00000547517 CYP19A1P11511 503 aaPredicted RBP15.6■□□□□ 0.09
RAB5C-204ENST00000547517 ADRA2BP18089 450 aa15.6■□□□□ 0.09
RAB5C-204ENST00000547517 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
RAB5C-204ENST00000547517 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
RAB5C-204ENST00000547517 INTS5Q6P9B9 1019 aaKnown RBP15.6■□□□□ 0.09
RAB5C-204ENST00000547517 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
RAB5C-204ENST00000547517 FHDC1Q9C0D6 1143 aaPredicted RBP15.6■□□□□ 0.09
RAB5C-204ENST00000547517 RRP7AQ9Y3A4 280 aaKnown RBP15.6■□□□□ 0.09
RAB5C-204ENST00000547517 TMPOP42166 694 aaKnown RBP15.59■□□□□ 0.09
RAB5C-204ENST00000547517 RIPK4P57078 832 aa15.59■□□□□ 0.09
RAB5C-204ENST00000547517 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
RAB5C-204ENST00000547517 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
RAB5C-204ENST00000547517 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
RAB5C-204ENST00000547517 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms