RNA–Protein interactions for RNA: ENST00000545162.5

SOD2-214, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-214ENST00000545162 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
SOD2-214ENST00000545162 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
SOD2-214ENST00000545162 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
SOD2-214ENST00000545162 NEFMP07197 916 aa16■□□□□ 0.15
SOD2-214ENST00000545162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
SOD2-214ENST00000545162 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
SOD2-214ENST00000545162 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
SOD2-214ENST00000545162 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
SOD2-214ENST00000545162 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
SOD2-214ENST00000545162 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
SOD2-214ENST00000545162 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
SOD2-214ENST00000545162 SCN11AQ9UI33 1791 aa15.99■□□□□ 0.15
SOD2-214ENST00000545162 MSH5O43196 834 aa15.98■□□□□ 0.15
SOD2-214ENST00000545162 NLGN2Q8NFZ4 835 aa15.98■□□□□ 0.15
SOD2-214ENST00000545162 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
SOD2-214ENST00000545162 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
SOD2-214ENST00000545162 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
SOD2-214ENST00000545162 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
SOD2-214ENST00000545162 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
SOD2-214ENST00000545162 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
SOD2-214ENST00000545162 ITGB4P16144 1822 aa15.96■□□□□ 0.15
SOD2-214ENST00000545162 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
SOD2-214ENST00000545162 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
SOD2-214ENST00000545162 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
SOD2-214ENST00000545162 ZNF530Q6P9A1 599 aaPredicted RBP15.95■□□□□ 0.14
SOD2-214ENST00000545162 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
SOD2-214ENST00000545162 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
SOD2-214ENST00000545162 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
SOD2-214ENST00000545162 MSL1Q68DK7 614 aa15.94■□□□□ 0.14
SOD2-214ENST00000545162 CYP27B1O15528 508 aa15.93■□□□□ 0.14
SOD2-214ENST00000545162 PHKG2P15735 406 aa15.93■□□□□ 0.14
SOD2-214ENST00000545162 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
SOD2-214ENST00000545162 C5P01031 1676 aa15.92■□□□□ 0.14
SOD2-214ENST00000545162 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.147e-7■□□□□ 10.1
SOD2-214ENST00000545162 HMGB2P26583 209 aaKnown RBP15.92■□□□□ 0.14
SOD2-214ENST00000545162 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
SOD2-214ENST00000545162 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
SOD2-214ENST00000545162 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 GRIN3BO60391 1043 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
SOD2-214ENST00000545162 NFE2L2Q16236 605 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 FLAD1Q8NFF5 587 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
SOD2-214ENST00000545162 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
SOD2-214ENST00000545162 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
SOD2-214ENST00000545162 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
SOD2-214ENST00000545162 MRC1P22897 1456 aa15.9■□□□□ 0.14
SOD2-214ENST00000545162 CEP350Q5VT06 3117 aa15.9■□□□□ 0.14
SOD2-214ENST00000545162 GNAT3A8MTJ3 354 aa15.89■□□□□ 0.13
SOD2-214ENST00000545162 APAF1O14727 1248 aa15.89■□□□□ 0.13
SOD2-214ENST00000545162 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
SOD2-214ENST00000545162 NKX1-1Q15270 411 aaPredicted RBP15.88■□□□□ 0.13
SOD2-214ENST00000545162 RRP7AQ9Y3A4 280 aaKnown RBP15.88■□□□□ 0.13
SOD2-214ENST00000545162 CD2APQ9Y5K6 639 aa15.88■□□□□ 0.13
SOD2-214ENST00000545162 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
SOD2-214ENST00000545162 PIGBQ92521 554 aa15.87■□□□□ 0.13
SOD2-214ENST00000545162 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
SOD2-214ENST00000545162 DCAF5Q96JK2 942 aa15.87■□□□□ 0.13
SOD2-214ENST00000545162 C4BP0C0L5 1744 aa15.87■□□□□ 0.13
SOD2-214ENST00000545162 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
SOD2-214ENST00000545162 RIPK4P57078 832 aa15.86■□□□□ 0.13
SOD2-214ENST00000545162 AK7Q96M32 723 aa15.86■□□□□ 0.13
SOD2-214ENST00000545162 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
SOD2-214ENST00000545162 AMIGO3Q86WK7 504 aa15.85■□□□□ 0.13
SOD2-214ENST00000545162 CEMIPQ8WUJ3 1361 aa15.85■□□□□ 0.13
SOD2-214ENST00000545162 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
SOD2-214ENST00000545162 PHF14O94880 888 aa15.84■□□□□ 0.13
SOD2-214ENST00000545162 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
SOD2-214ENST00000545162 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
SOD2-214ENST00000545162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.83■□□□□ 0.12
SOD2-214ENST00000545162 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
SOD2-214ENST00000545162 LOC102724428A0A0B4J2F2 783 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 SIK1P57059 783 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
SOD2-214ENST00000545162 MCM10Q7L590 875 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 NGEFQ8N5V2 710 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 IL17REQ8NFR9 667 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
SOD2-214ENST00000545162 SSFA2P28290 1259 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 CABP4P57796 275 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 TEFQ10587 303 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
SOD2-214ENST00000545162 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
SOD2-214ENST00000545162 SLC52A2Q9HAB3 445 aa15.8■□□□□ 0.12
SOD2-214ENST00000545162 ASAP1Q9ULH1 1129 aa15.8■□□□□ 0.12
SOD2-214ENST00000545162 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
SOD2-214ENST00000545162 GNPATO15228 680 aa15.78■□□□□ 0.12
SOD2-214ENST00000545162 ATP6V1AP38606 617 aa15.78■□□□□ 0.12
SOD2-214ENST00000545162 HNRNPUQ00839 825 aaKnown RBP eCLIP15.78■□□□□ 0.12
SOD2-214ENST00000545162 ITPK1Q13572 414 aa15.78■□□□□ 0.12
SOD2-214ENST00000545162 WWC1Q8IX03 1113 aa15.78■□□□□ 0.12
SOD2-214ENST00000545162 GPBP1L1Q9HC44 474 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms