RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
PDCD2-213ENST00000544866 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
PDCD2-213ENST00000544866 CEMIPQ8WUJ3 1361 aa22.34■■□□□ 1.17
PDCD2-213ENST00000544866 KCNQ4P56696 695 aa22.33■■□□□ 1.17
PDCD2-213ENST00000544866 TUBGCP6Q96RT7 1819 aa22.33■■□□□ 1.16
PDCD2-213ENST00000544866 MAPK8IP3Q9UPT6 1336 aa22.32■■□□□ 1.16
PDCD2-213ENST00000544866 NBPF14Q5TI25 921 aa22.32■■□□□ 1.16
PDCD2-213ENST00000544866 CCNL1Q9UK58 526 aaPredicted RBP22.32■■□□□ 1.16
PDCD2-213ENST00000544866 SRCAPQ6ZRS2 3230 aa22.32■■□□□ 1.16
PDCD2-213ENST00000544866 UBR2Q8IWV8 1755 aa22.31■■□□□ 1.16
PDCD2-213ENST00000544866 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
PDCD2-213ENST00000544866 NEFMP07197 916 aa22.31■■□□□ 1.16
PDCD2-213ENST00000544866 R3HDM1Q15032 1099 aaKnown RBP22.31■■□□□ 1.16
PDCD2-213ENST00000544866 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
PDCD2-213ENST00000544866 QSER1Q2KHR3 1735 aa22.31■■□□□ 1.16
PDCD2-213ENST00000544866 CCDC146Q8IYE0 955 aa22.3■■□□□ 1.16
PDCD2-213ENST00000544866 CICQ96RK0 1608 aaPredicted RBP22.29■■□□□ 1.16
PDCD2-213ENST00000544866 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
PDCD2-213ENST00000544866 MRS2Q9HD23 443 aa22.29■■□□□ 1.16
PDCD2-213ENST00000544866 COL5A3P25940 1745 aaPredicted RBP22.28■■□□□ 1.16
PDCD2-213ENST00000544866 CASZ1Q86V15 1759 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 SIK1P57059 783 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 ZNF827Q17R98 1081 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 TJP1Q07157 1748 aa22.28■■□□□ 1.16
PDCD2-213ENST00000544866 KCPQ6ZWJ8 1503 aa22.27■■□□□ 1.16
PDCD2-213ENST00000544866 MCM10Q7L590 875 aa22.27■■□□□ 1.16
PDCD2-213ENST00000544866 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
PDCD2-213ENST00000544866 SLC4A9Q96Q91 983 aa22.27■■□□□ 1.16
PDCD2-213ENST00000544866 TEFQ10587 303 aa22.26■■□□□ 1.15
PDCD2-213ENST00000544866 DCTN1Q14203 1278 aa22.26■■□□□ 1.15
PDCD2-213ENST00000544866 SLC15A2Q16348 729 aa22.26■■□□□ 1.15
PDCD2-213ENST00000544866 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
PDCD2-213ENST00000544866 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
PDCD2-213ENST00000544866 AKT1S1Q96B36 256 aa22.26■■□□□ 1.15
PDCD2-213ENST00000544866 STK32BQ9NY57 414 aa22.26■■□□□ 1.15
PDCD2-213ENST00000544866 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
PDCD2-213ENST00000544866 TMPOP42166 694 aaKnown RBP22.24■■□□□ 1.15
PDCD2-213ENST00000544866 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
PDCD2-213ENST00000544866 ITPK1Q13572 414 aa22.24■■□□□ 1.15
PDCD2-213ENST00000544866 MYH14Q7Z406 1995 aaKnown RBP22.23■■□□□ 1.15
PDCD2-213ENST00000544866 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
PDCD2-213ENST00000544866 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
PDCD2-213ENST00000544866 RIPK4P57078 832 aa22.22■■□□□ 1.15
PDCD2-213ENST00000544866 LINC00116Q8NCU8 138 aa22.22■■□□□ 1.15
PDCD2-213ENST00000544866 RBM42Q9BTD8 480 aaKnown RBP22.22■■□□□ 1.15
PDCD2-213ENST00000544866 PTCD1O75127 700 aaKnown RBP22.21■■□□□ 1.15
PDCD2-213ENST00000544866 RRP7AQ9Y3A4 280 aaKnown RBP22.21■■□□□ 1.15
PDCD2-213ENST00000544866 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
PDCD2-213ENST00000544866 HMGB2P26583 209 aaKnown RBP22.19■■□□□ 1.14
PDCD2-213ENST00000544866 PDGFDQ9GZP0 370 aaPredicted RBP22.19■■□□□ 1.14
PDCD2-213ENST00000544866 ZNF790Q6PG37 636 aa22.18■■□□□ 1.14
PDCD2-213ENST00000544866 BTBD11A6QL63 1104 aa22.17■■□□□ 1.14
PDCD2-213ENST00000544866 KCNQ3O43525 872 aa22.17■■□□□ 1.14
PDCD2-213ENST00000544866 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
PDCD2-213ENST00000544866 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
PDCD2-213ENST00000544866 LRP5O75197 1615 aa22.17■■□□□ 1.14
PDCD2-213ENST00000544866 PNPLA7Q6ZV29 1317 aa22.16■■□□□ 1.14
PDCD2-213ENST00000544866 APAF1O14727 1248 aa22.16■■□□□ 1.14
PDCD2-213ENST00000544866 LMOD3Q0VAK6 560 aa22.16■■□□□ 1.14
PDCD2-213ENST00000544866 TAF7Q15545 349 aaPredicted RBP22.16■■□□□ 1.14
PDCD2-213ENST00000544866 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
PDCD2-213ENST00000544866 TFCP2L1Q9NZI6 479 aa22.16■■□□□ 1.14
PDCD2-213ENST00000544866 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
PDCD2-213ENST00000544866 AMIGO3Q86WK7 504 aa22.15■■□□□ 1.14
PDCD2-213ENST00000544866 ZNF496Q96IT1 587 aaPredicted RBP22.15■■□□□ 1.14
PDCD2-213ENST00000544866 HEG1Q9ULI3 1381 aa22.13■■□□□ 1.13
PDCD2-213ENST00000544866 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
PDCD2-213ENST00000544866 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
PDCD2-213ENST00000544866 VSIG10Q8N0Z9 540 aa22.13■■□□□ 1.13
PDCD2-213ENST00000544866 AK7Q96M32 723 aa22.13■■□□□ 1.13
PDCD2-213ENST00000544866 COL24A1Q17RW2 1714 aa22.12■■□□□ 1.13
PDCD2-213ENST00000544866 RC3H1Q5TC82 1133 aaKnown RBP22.12■■□□□ 1.13
PDCD2-213ENST00000544866 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
PDCD2-213ENST00000544866 FMNL2Q96PY5 1086 aa22.11■■□□□ 1.13
PDCD2-213ENST00000544866 CCER2I3L3R5 266 aa22.1■■□□□ 1.13
PDCD2-213ENST00000544866 GNPATO15228 680 aa22.1■■□□□ 1.13
PDCD2-213ENST00000544866 CRKLP46109 303 aaKnown RBP22.1■■□□□ 1.13
PDCD2-213ENST00000544866 SMIM5Q71RC9 77 aa22.1■■□□□ 1.13
PDCD2-213ENST00000544866 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
PDCD2-213ENST00000544866 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
PDCD2-213ENST00000544866 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
PDCD2-213ENST00000544866 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
PDCD2-213ENST00000544866 ZBTB7AO95365 584 aa22.08■■□□□ 1.13
PDCD2-213ENST00000544866 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.13
PDCD2-213ENST00000544866 SSFA2P28290 1259 aa22.08■■□□□ 1.13
PDCD2-213ENST00000544866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.07■■□□□ 1.12
PDCD2-213ENST00000544866 INTS5Q6P9B9 1019 aaKnown RBP22.07■■□□□ 1.12
PDCD2-213ENST00000544866 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
PDCD2-213ENST00000544866 PHF14O94880 888 aa22.06■■□□□ 1.12
PDCD2-213ENST00000544866 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
PDCD2-213ENST00000544866 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 EIF4A1P60842 406 aaKnown RBP22.05■■□□□ 1.12
PDCD2-213ENST00000544866 SLC16A10Q8TF71 515 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
PDCD2-213ENST00000544866 RTCBQ9Y3I0 505 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms