RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 YTHDC1Q96MU7 727 aaKnown RBP27.27■■□□□ 1.96
OTUB1-211ENST00000543004 TMOD3Q9NYL9 352 aa27.27■■□□□ 1.96
OTUB1-211ENST00000543004 MIS18AQ9NYP9 233 aa27.27■■□□□ 1.96
OTUB1-211ENST00000543004 TNS1Q9HBL0 1735 aaKnown RBP27.26■■□□□ 1.95
OTUB1-211ENST00000543004 NCBP3Q53F19 620 aaKnown RBP27.25■■□□□ 1.95
OTUB1-211ENST00000543004 BCL11BQ9C0K0 894 aaPredicted RBP27.24■■□□□ 1.95
OTUB1-211ENST00000543004 ZNF521Q96K83 1311 aa27.24■■□□□ 1.95
OTUB1-211ENST00000543004 SLC39A6Q13433 755 aa27.23■■□□□ 1.95
OTUB1-211ENST00000543004 ASAP1Q9ULH1 1129 aa27.23■■□□□ 1.95
OTUB1-211ENST00000543004 LAS1LQ9Y4W2 734 aaKnown RBP27.23■■□□□ 1.95
OTUB1-211ENST00000543004 TAF7Q15545 349 aaPredicted RBP27.22■■□□□ 1.95
OTUB1-211ENST00000543004 PAPPAQ13219 1627 aa27.22■■□□□ 1.95
OTUB1-211ENST00000543004 NGEFQ8N5V2 710 aa27.21■■□□□ 1.95
OTUB1-211ENST00000543004 SPINK5Q9NQ38 1064 aaPredicted RBP27.21■■□□□ 1.95
OTUB1-211ENST00000543004 KDM3BQ7LBC6 1761 aa27.2■■□□□ 1.95
OTUB1-211ENST00000543004 BTBD11A6QL63 1104 aa27.2■■□□□ 1.95
OTUB1-211ENST00000543004 KCNQ3O43525 872 aa27.2■■□□□ 1.95
OTUB1-211ENST00000543004 ATG3Q9NT62 314 aa27.19■■□□□ 1.94
OTUB1-211ENST00000543004 WDR63Q8IWG1 891 aa27.17■■□□□ 1.94
OTUB1-211ENST00000543004 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
OTUB1-211ENST00000543004 CDCA7LQ96GN5 454 aa27.16■■□□□ 1.94
OTUB1-211ENST00000543004 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
OTUB1-211ENST00000543004 APBA3O96018 575 aa27.16■■□□□ 1.94
OTUB1-211ENST00000543004 CFAP44Q96MT7 982 aa27.16■■□□□ 1.94
OTUB1-211ENST00000543004 CHL1O00533 1208 aa27.15■■□□□ 1.94
OTUB1-211ENST00000543004 TSPYL4Q9UJ04 414 aa27.15■■□□□ 1.94
OTUB1-211ENST00000543004 ZBED9Q6R2W3 1325 aa27.14■■□□□ 1.94
OTUB1-211ENST00000543004 CALD1Q05682 793 aaKnown RBP27.14■■□□□ 1.94
OTUB1-211ENST00000543004 ZNF790Q6PG37 636 aa27.14■■□□□ 1.94
OTUB1-211ENST00000543004 TSR2Q969E8 191 aaKnown RBP27.14■■□□□ 1.94
OTUB1-211ENST00000543004 MBIPQ9NS73 344 aa27.14■■□□□ 1.94
OTUB1-211ENST00000543004 IFT57Q9NWB7 429 aa27.14■■□□□ 1.94
OTUB1-211ENST00000543004 LY75O60449 1722 aa27.14■■□□□ 1.93
OTUB1-211ENST00000543004 KCPQ6ZWJ8 1503 aa27.13■■□□□ 1.93
OTUB1-211ENST00000543004 PALLDQ8WX93 1383 aa27.13■■□□□ 1.93
OTUB1-211ENST00000543004 PTCD1O75127 700 aaKnown RBP27.12■■□□□ 1.93
OTUB1-211ENST00000543004 GOLGA2Q08379 1002 aa27.12■■□□□ 1.93
OTUB1-211ENST00000543004 UPF1Q92900 1129 aaKnown RBP eCLIP27.12■■□□□ 1.939e-8■■■□□ 18.2
OTUB1-211ENST00000543004 IL16Q14005 1332 aa27.12■■□□□ 1.93
OTUB1-211ENST00000543004 GNAI1P63096 354 aa27.12■■□□□ 1.93
OTUB1-211ENST00000543004 KCNQ4P56696 695 aa27.1■■□□□ 1.93
OTUB1-211ENST00000543004 TTC5Q8N0Z6 440 aa27.1■■□□□ 1.93
OTUB1-211ENST00000543004 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
OTUB1-211ENST00000543004 KRT24Q2M2I5 525 aa27.09■■□□□ 1.93
OTUB1-211ENST00000543004 DEFB132Q7Z7B7 95 aa27.09■■□□□ 1.93
OTUB1-211ENST00000543004 SLC4A9Q96Q91 983 aa27.09■■□□□ 1.93
OTUB1-211ENST00000543004 RBM42Q9BTD8 480 aaKnown RBP27.09■■□□□ 1.93
OTUB1-211ENST00000543004 EN1Q05925 392 aaPredicted RBP27.08■■□□□ 1.93
OTUB1-211ENST00000543004 SLFN5Q08AF3 891 aa27.08■■□□□ 1.93
OTUB1-211ENST00000543004 FANCIQ9NVI1 1328 aa27.07■■□□□ 1.92
OTUB1-211ENST00000543004 EIF4A1P60842 406 aaKnown RBP27.07■■□□□ 1.92
OTUB1-211ENST00000543004 SF3B2Q13435 895 aaKnown RBP27.07■■□□□ 1.92
OTUB1-211ENST00000543004 SMARCC1Q92922 1105 aaPredicted RBP27.07■■□□□ 1.92
OTUB1-211ENST00000543004 BABAM1Q9NWV8 329 aa27.07■■□□□ 1.92
OTUB1-211ENST00000543004 C5P01031 1676 aa27.07■■□□□ 1.92
OTUB1-211ENST00000543004 PROM2Q8N271 834 aa27.06■■□□□ 1.92
OTUB1-211ENST00000543004 PRAMEF22A3QJZ6 481 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 PLSCR1O15162 318 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 TJP1Q07157 1748 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 RGPD3A6NKT7 1758 aaPredicted RBP27.05■■□□□ 1.92
OTUB1-211ENST00000543004 RGPD4Q7Z3J3 1758 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 LOC102724428A0A0B4J2F2 783 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 SIK1P57059 783 aa27.05■■□□□ 1.92
OTUB1-211ENST00000543004 E9PSI1 815 aa27.04■■□□□ 1.92
OTUB1-211ENST00000543004 EZH2Q15910 746 aaKnown RBP27.04■■□□□ 1.92
OTUB1-211ENST00000543004 CCDC125Q86Z20 511 aa27.04■■□□□ 1.92
OTUB1-211ENST00000543004 FMNL2Q96PY5 1086 aa27.03■■□□□ 1.92
OTUB1-211ENST00000543004 LRRC4BQ9NT99 713 aa27.03■■□□□ 1.92
OTUB1-211ENST00000543004 CAMKK2Q96RR4 588 aa27.02■■□□□ 1.92
OTUB1-211ENST00000543004 MYH16Q9H6N6 1097 aa27.02■■□□□ 1.92
OTUB1-211ENST00000543004 HEG1Q9ULI3 1381 aa27.02■■□□□ 1.92
OTUB1-211ENST00000543004 TAF1LQ8IZX4 1826 aa27.02■■□□□ 1.92
OTUB1-211ENST00000543004 ATP6V1AP38606 617 aa27.01■■□□□ 1.92
OTUB1-211ENST00000543004 BAG6P46379 1132 aa27.01■■□□□ 1.92
OTUB1-211ENST00000543004 ITPK1Q13572 414 aa27.01■■□□□ 1.92
OTUB1-211ENST00000543004 TXNRD1Q16881 649 aa27.01■■□□□ 1.92
OTUB1-211ENST00000543004 TRMT2AQ8IZ69 625 aaKnown RBP27.01■■□□□ 1.92
OTUB1-211ENST00000543004 C8orf58Q8NAV2 365 aa27.01■■□□□ 1.92
OTUB1-211ENST00000543004 CCNL1Q9UK58 526 aaPredicted RBP27.01■■□□□ 1.92
OTUB1-211ENST00000543004 ELL2O00472 640 aaPredicted RBP27.01■■□□□ 1.91
OTUB1-211ENST00000543004 DUSP27Q5VZP5 1158 aa27■■□□□ 1.91
OTUB1-211ENST00000543004 TSPYL6Q8N831 410 aa27■■□□□ 1.91
OTUB1-211ENST00000543004 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
OTUB1-211ENST00000543004 EXOSC9Q06265 439 aaKnown RBP26.99■■□□□ 1.91
OTUB1-211ENST00000543004 DNAJC10Q8IXB1 793 aa26.99■■□□□ 1.91
OTUB1-211ENST00000543004 COL5A3P25940 1745 aaPredicted RBP26.98■■□□□ 1.91
OTUB1-211ENST00000543004 RREB1Q92766 1687 aa26.98■■□□□ 1.91
OTUB1-211ENST00000543004 GIGYF1O75420 1035 aaPredicted RBP26.98■■□□□ 1.91
OTUB1-211ENST00000543004 CICQ96RK0 1608 aaPredicted RBP26.97■■□□□ 1.91
OTUB1-211ENST00000543004 USP16Q9Y5T5 823 aa26.97■■□□□ 1.91
OTUB1-211ENST00000543004 LAMB4A4D0S4 1761 aa26.96■■□□□ 1.91
OTUB1-211ENST00000543004 SNRPA1P09661 255 aaKnown RBP26.95■■□□□ 1.91
OTUB1-211ENST00000543004 VSIG10Q8N0Z9 540 aa26.95■■□□□ 1.91
OTUB1-211ENST00000543004 LINC00116Q8NCU8 138 aa26.95■■□□□ 1.91
OTUB1-211ENST00000543004 NUP188Q5SRE5 1749 aa26.95■■□□□ 1.9
OTUB1-211ENST00000543004 MYH14Q7Z406 1995 aaKnown RBP26.94■■□□□ 1.9
OTUB1-211ENST00000543004 SLC27A3Q5K4L6 730 aa26.94■■□□□ 1.9
OTUB1-211ENST00000543004 NECTIN2Q92692 538 aa26.93■■□□□ 1.9
OTUB1-211ENST00000543004 C4BP0C0L5 1744 aa26.91■■□□□ 1.9
OTUB1-211ENST00000543004 CYP19A1P11511 503 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms