RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
DDX55-206ENST00000539934 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
DDX55-206ENST00000539934 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
DDX55-206ENST00000539934 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
DDX55-206ENST00000539934 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 SSH2Q76I76 1423 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 SH3BP1Q9Y3L3 701 aa15.79■□□□□ 0.12
DDX55-206ENST00000539934 GOLGA6L3A6NEY3 463 aa15.78■□□□□ 0.12
DDX55-206ENST00000539934 RREB1Q92766 1687 aa15.78■□□□□ 0.12
DDX55-206ENST00000539934 NSD2O96028 1365 aa15.78■□□□□ 0.12
DDX55-206ENST00000539934 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
DDX55-206ENST00000539934 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
DDX55-206ENST00000539934 ACEP12821 1306 aa15.76■□□□□ 0.11
DDX55-206ENST00000539934 TTC36A6NLP5 189 aa15.76■□□□□ 0.11
DDX55-206ENST00000539934 BARGINQ6ZT62 677 aa15.76■□□□□ 0.11
DDX55-206ENST00000539934 PHRF1Q9P1Y6 1649 aaKnown RBP15.76■□□□□ 0.11
DDX55-206ENST00000539934 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
DDX55-206ENST00000539934 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
DDX55-206ENST00000539934 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
DDX55-206ENST00000539934 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
DDX55-206ENST00000539934 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
DDX55-206ENST00000539934 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
DDX55-206ENST00000539934 ATP7BP35670 1465 aa15.74■□□□□ 0.11
DDX55-206ENST00000539934 CD163L1Q9NR16 1453 aa15.74■□□□□ 0.11
DDX55-206ENST00000539934 CABP1Q9NZU7 370 aa15.74■□□□□ 0.11
DDX55-206ENST00000539934 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
DDX55-206ENST00000539934 TERF1P54274 439 aa15.74■□□□□ 0.11
DDX55-206ENST00000539934 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
DDX55-206ENST00000539934 ZSCAN20P17040 1043 aaPredicted RBP15.73■□□□□ 0.11
DDX55-206ENST00000539934 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
DDX55-206ENST00000539934 PROM2Q8N271 834 aa15.72■□□□□ 0.11
DDX55-206ENST00000539934 KIF20BQ96Q89 1820 aa15.72■□□□□ 0.11
DDX55-206ENST00000539934 GCP02774 474 aa15.71■□□□□ 0.1
DDX55-206ENST00000539934 L1TD1Q5T7N2 865 aaKnown RBP15.71■□□□□ 0.1
DDX55-206ENST00000539934 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
DDX55-206ENST00000539934 GGNBP2Q9H3C7 697 aa15.7■□□□□ 0.1
DDX55-206ENST00000539934 E9PSI1 815 aa15.7■□□□□ 0.1
DDX55-206ENST00000539934 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
DDX55-206ENST00000539934 FHDC1Q9C0D6 1143 aaPredicted RBP15.7■□□□□ 0.1
DDX55-206ENST00000539934 PPIP5K1Q6PFW1 1433 aa15.69■□□□□ 0.1
DDX55-206ENST00000539934 PTGER2P43116 358 aa15.69■□□□□ 0.1
DDX55-206ENST00000539934 MTHFSP49914 203 aa15.69■□□□□ 0.1
DDX55-206ENST00000539934 DDB1Q16531 1140 aa15.68■□□□□ 0.1
DDX55-206ENST00000539934 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
DDX55-206ENST00000539934 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
DDX55-206ENST00000539934 FYB1O15117 783 aa15.68■□□□□ 0.1
DDX55-206ENST00000539934 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
DDX55-206ENST00000539934 COL5A2P05997 1499 aaPredicted RBP15.68■□□□□ 0.1
DDX55-206ENST00000539934 SYT17Q9BSW7 474 aa15.67■□□□□ 0.1
DDX55-206ENST00000539934 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
DDX55-206ENST00000539934 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
DDX55-206ENST00000539934 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
DDX55-206ENST00000539934 ITSN1Q15811 1721 aa15.67■□□□□ 0.1
DDX55-206ENST00000539934 LMO7Q8WWI1 1683 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 MARCH10Q8NA82 808 aaPredicted RBP15.66■□□□□ 0.1
DDX55-206ENST00000539934 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
DDX55-206ENST00000539934 IRF6O14896 467 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 PLSCR1O15162 318 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
DDX55-206ENST00000539934 NBPF9Q3BBW0 867 aa15.65■□□□□ 0.1
DDX55-206ENST00000539934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.65■□□□□ 0.1
DDX55-206ENST00000539934 NLRP6P59044 892 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 NFKBIBQ15653 356 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 CRB1P82279 1406 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 USP19O94966 1318 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 CPDO75976 1380 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 MON2Q7Z3U7 1717 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 AKAP12Q02952 1782 aa15.64■□□□□ 0.09
DDX55-206ENST00000539934 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
DDX55-206ENST00000539934 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
DDX55-206ENST00000539934 APAF1O14727 1248 aa15.63■□□□□ 0.09
DDX55-206ENST00000539934 TXNRD1Q16881 649 aa15.63■□□□□ 0.09
DDX55-206ENST00000539934 CASZ1Q86V15 1759 aa15.63■□□□□ 0.09
DDX55-206ENST00000539934 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
DDX55-206ENST00000539934 PEAK1Q9H792 1746 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 PLEKHG3A1L390 1219 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 C1QTNF8P60827 252 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 ACSBG1Q96GR2 724 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 RCAN3Q9UKA8 241 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 LRRC37A3O60309 1634 aa15.62■□□□□ 0.09
DDX55-206ENST00000539934 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
DDX55-206ENST00000539934 SLC15A2Q16348 729 aa15.61■□□□□ 0.09
DDX55-206ENST00000539934 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
DDX55-206ENST00000539934 KAT6BQ8WYB5 2073 aa15.61■□□□□ 0.09
DDX55-206ENST00000539934 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
DDX55-206ENST00000539934 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
DDX55-206ENST00000539934 ZNF521Q96K83 1311 aa15.59■□□□□ 0.09
DDX55-206ENST00000539934 CSB-PGBD3P0DP91 1061 aa15.59■□□□□ 0.09
DDX55-206ENST00000539934 OTUD6BQ8N6M0 293 aa15.59■□□□□ 0.09
DDX55-206ENST00000539934 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
DDX55-206ENST00000539934 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
DDX55-206ENST00000539934 IRX5P78411 483 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms