RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 IL17REQ8NFR9 667 aa26.74■■□□□ 1.87
COPS7A-208ENST00000538410 NUP188Q5SRE5 1749 aa26.73■■□□□ 1.87
COPS7A-208ENST00000538410 FANCIQ9NVI1 1328 aa26.73■■□□□ 1.87
COPS7A-208ENST00000538410 PLSCR1O15162 318 aa26.73■■□□□ 1.87
COPS7A-208ENST00000538410 RGPD3A6NKT7 1758 aaPredicted RBP26.73■■□□□ 1.87
COPS7A-208ENST00000538410 RGPD4Q7Z3J3 1758 aa26.73■■□□□ 1.87
COPS7A-208ENST00000538410 R3HDM1Q15032 1099 aaKnown RBP26.72■■□□□ 1.87
COPS7A-208ENST00000538410 CFAP44Q96MT7 982 aa26.72■■□□□ 1.87
COPS7A-208ENST00000538410 LAS1LQ9Y4W2 734 aaKnown RBP26.72■■□□□ 1.87
COPS7A-208ENST00000538410 TSR2Q969E8 191 aaKnown RBP26.72■■□□□ 1.87
COPS7A-208ENST00000538410 CEMIPQ8WUJ3 1361 aa26.72■■□□□ 1.87
COPS7A-208ENST00000538410 SIPA1L3O60292 1781 aaPredicted RBP26.71■■□□□ 1.87
COPS7A-208ENST00000538410 PHKG2P15735 406 aa26.71■■□□□ 1.87
COPS7A-208ENST00000538410 IFNL2Q8IZJ0 200 aa26.71■■□□□ 1.87
COPS7A-208ENST00000538410 ZCRB1Q8TBF4 217 aaKnown RBP26.71■■□□□ 1.87
COPS7A-208ENST00000538410 KAT6BQ8WYB5 2073 aa26.7■■□□□ 1.87
COPS7A-208ENST00000538410 NBPF14Q5TI25 921 aa26.7■■□□□ 1.86
COPS7A-208ENST00000538410 NHSQ6T4R5 1651 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 CYP27B1O15528 508 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 MPRIPQ6WCQ1 1025 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 LGR6Q9HBX8 967 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 PCDH11XQ9BZA7 1347 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 PCDH11YQ9BZA8 1340 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 DDX54Q8TDD1 881 aaKnown RBP26.68■■□□□ 1.86
COPS7A-208ENST00000538410 ACSBG1Q96GR2 724 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 RCAN3Q9UKA8 241 aa26.68■■□□□ 1.86
COPS7A-208ENST00000538410 RNMTO43148 476 aaKnown RBP26.67■■□□□ 1.86
COPS7A-208ENST00000538410 KCNQ2O43526 872 aa26.67■■□□□ 1.86
COPS7A-208ENST00000538410 MBIPQ9NS73 344 aa26.67■■□□□ 1.86
COPS7A-208ENST00000538410 CHL1O00533 1208 aa26.66■■□□□ 1.86
COPS7A-208ENST00000538410 SUPT16HQ9Y5B9 1047 aaKnown RBP26.66■■□□□ 1.86
COPS7A-208ENST00000538410 KDM6AO15550 1401 aaPredicted RBP26.65■■□□□ 1.86
COPS7A-208ENST00000538410 KDM3BQ7LBC6 1761 aa26.65■■□□□ 1.86
COPS7A-208ENST00000538410 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
COPS7A-208ENST00000538410 EXOSC9Q06265 439 aaKnown RBP26.64■■□□□ 1.85
COPS7A-208ENST00000538410 TAF7Q15545 349 aaPredicted RBP26.63■■□□□ 1.85
COPS7A-208ENST00000538410 LRP5O75197 1615 aa26.63■■□□□ 1.85
COPS7A-208ENST00000538410 DCAF5Q96JK2 942 aa26.62■■□□□ 1.85
COPS7A-208ENST00000538410 BABAM1Q9NWV8 329 aa26.62■■□□□ 1.85
COPS7A-208ENST00000538410 TEFQ10587 303 aa26.61■■□□□ 1.85
COPS7A-208ENST00000538410 SRCAPQ6ZRS2 3230 aa26.61■■□□□ 1.85
COPS7A-208ENST00000538410 BTAF1O14981 1849 aa26.6■■□□□ 1.85
COPS7A-208ENST00000538410 CT47B1P0C2W7 299 aaPredicted RBP26.6■■□□□ 1.85
COPS7A-208ENST00000538410 NKX1-1Q15270 411 aaPredicted RBP26.6■■□□□ 1.85
COPS7A-208ENST00000538410 PROM2Q8N271 834 aa26.6■■□□□ 1.85
COPS7A-208ENST00000538410 TSPYL4Q9UJ04 414 aa26.6■■□□□ 1.85
COPS7A-208ENST00000538410 MRC1P22897 1456 aa26.59■■□□□ 1.85
COPS7A-208ENST00000538410 MIS18AQ9NYP9 233 aa26.59■■□□□ 1.85
COPS7A-208ENST00000538410 TXNRD1Q16881 649 aa26.58■■□□□ 1.85
COPS7A-208ENST00000538410 TOGARAM1Q9Y4F4 1720 aa26.58■■□□□ 1.85
COPS7A-208ENST00000538410 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
COPS7A-208ENST00000538410 SLC52A2Q9HAB3 445 aa26.55■■□□□ 1.84
COPS7A-208ENST00000538410 DOT1LQ8TEK3 1739 aa26.55■■□□□ 1.84
COPS7A-208ENST00000538410 ITGB4P16144 1822 aa26.55■■□□□ 1.84
COPS7A-208ENST00000538410 BTBD11A6QL63 1104 aa26.53■■□□□ 1.84
COPS7A-208ENST00000538410 C8orf58Q8NAV2 365 aa26.53■■□□□ 1.84
COPS7A-208ENST00000538410 SYTL4Q96C24 671 aaPredicted RBP26.53■■□□□ 1.84
COPS7A-208ENST00000538410 ANO8Q9HCE9 1232 aaPredicted RBP26.53■■□□□ 1.84
COPS7A-208ENST00000538410 PRIM1P49642 420 aaKnown RBP26.52■■□□□ 1.84
COPS7A-208ENST00000538410 RARSP54136 660 aaKnown RBP26.52■■□□□ 1.84
COPS7A-208ENST00000538410 TSPYL6Q8N831 410 aa26.52■■□□□ 1.84
COPS7A-208ENST00000538410 TWISTNBQ3B726 338 aaPredicted RBP26.51■■□□□ 1.83
COPS7A-208ENST00000538410 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
COPS7A-208ENST00000538410 VAMP4O75379 141 aa26.5■■□□□ 1.83
COPS7A-208ENST00000538410 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
COPS7A-208ENST00000538410 RRP1P56182 461 aaKnown RBP26.5■■□□□ 1.83
COPS7A-208ENST00000538410 STK32BQ9NY57 414 aa26.5■■□□□ 1.83
COPS7A-208ENST00000538410 ELL2O00472 640 aaPredicted RBP26.49■■□□□ 1.83
COPS7A-208ENST00000538410 CABP4P57796 275 aa26.49■■□□□ 1.83
COPS7A-208ENST00000538410 KRT24Q2M2I5 525 aa26.49■■□□□ 1.83
COPS7A-208ENST00000538410 ZNF428Q96B54 188 aa26.49■■□□□ 1.83
COPS7A-208ENST00000538410 BCAR3O75815 825 aa26.48■■□□□ 1.83
COPS7A-208ENST00000538410 NEFLP07196 543 aa26.47■■□□□ 1.83
COPS7A-208ENST00000538410 PAPPAQ13219 1627 aa26.47■■□□□ 1.83
COPS7A-208ENST00000538410 SLC15A2Q16348 729 aa26.46■■□□□ 1.83
COPS7A-208ENST00000538410 KCNQ3O43525 872 aa26.45■■□□□ 1.82
COPS7A-208ENST00000538410 EIF4A1P60842 406 aaKnown RBP26.45■■□□□ 1.82
COPS7A-208ENST00000538410 ALDH1L2Q3SY69 923 aa26.45■■□□□ 1.82
COPS7A-208ENST00000538410 GTF3C3Q9Y5Q9 886 aa26.45■■□□□ 1.82
COPS7A-208ENST00000538410 UBR2Q8IWV8 1755 aa26.44■■□□□ 1.82
COPS7A-208ENST00000538410 SSH1Q8WYL5 1049 aa26.44■■□□□ 1.82
COPS7A-208ENST00000538410 CACNA1FO60840 1977 aa26.44■■□□□ 1.82
COPS7A-208ENST00000538410 SOS1Q07889 1333 aaPredicted RBP26.43■■□□□ 1.82
COPS7A-208ENST00000538410 CASZ1Q86V15 1759 aa26.43■■□□□ 1.82
COPS7A-208ENST00000538410 ZNF790Q6PG37 636 aa26.43■■□□□ 1.82
COPS7A-208ENST00000538410 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.43■■□□□ 1.82
COPS7A-208ENST00000538410 BCL2L13Q9BXK5 485 aa26.43■■□□□ 1.82
COPS7A-208ENST00000538410 SPON1Q9HCB6 807 aa26.43■■□□□ 1.82
COPS7A-208ENST00000538410 SLC27A3Q5K4L6 730 aa26.42■■□□□ 1.82
COPS7A-208ENST00000538410 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
COPS7A-208ENST00000538410 SMC4Q9NTJ3 1288 aa26.42■■□□□ 1.82
COPS7A-208ENST00000538410 LY75O60449 1722 aa26.41■■□□□ 1.82
COPS7A-208ENST00000538410 SLC39A6Q13433 755 aa26.41■■□□□ 1.82
COPS7A-208ENST00000538410 HEG1Q9ULI3 1381 aa26.4■■□□□ 1.82
COPS7A-208ENST00000538410 PLIN1O60240 522 aa26.4■■□□□ 1.82
COPS7A-208ENST00000538410 IRX6P78412 446 aaPredicted RBP26.39■■□□□ 1.82
COPS7A-208ENST00000538410 TMOD3Q9NYL9 352 aa26.39■■□□□ 1.82
COPS7A-208ENST00000538410 C5P01031 1676 aa26.39■■□□□ 1.82
COPS7A-208ENST00000538410 FKBP8Q14318 412 aa26.39■■□□□ 1.81
COPS7A-208ENST00000538410 PDGFDQ9GZP0 370 aaPredicted RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms