RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PLXNC1O60486 1568 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 DIP2CQ9Y2E4 1556 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 YEATS2Q9ULM3 1422 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 ABCA6Q8N139 1617 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 FAM174AQ8TBP5 190 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 MRGPRX2Q96LB1 330 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 PKD2L1Q9P0L9 805 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 ATP10AO60312 1499 aa6.44□□□□□ -1.38
SNHG1-208ENST00000538266 TNFRSF10AO00220 468 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 SIAH2O43255 324 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 GDF9O60383 454 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 ARID5BQ14865 1188 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 PROSER2Q86WR7 435 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-208ENST00000538266 FNBP4Q8N3X1 1017 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-208ENST00000538266 CHIC2Q9UKJ5 165 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 ARID4BQ4LE39 1312 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-208ENST00000538266 KIF15Q9NS87 1388 aa6.43□□□□□ -1.38
SNHG1-208ENST00000538266 A2MP01023 1474 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 DUOX2Q9NRD8 1548 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 TTC24A2A3L6 582 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-208ENST00000538266 TRAK2O60296 914 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNHG1-208ENST00000538266 ERFEQ4G0M1 354 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 DZIP3Q86Y13 1208 aaKnown RBP6.42□□□□□ -1.38
SNHG1-208ENST00000538266 CYP4X1Q8N118 509 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 RRP7BPQ9NSQ0 103 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 REREQ9P2R6 1566 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 ROCK1Q13464 1354 aa6.42□□□□□ -1.38
SNHG1-208ENST00000538266 ADGRL2O95490 1459 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 SEMA3FQ13275 785 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 SNIP1Q8TAD8 396 aaKnown RBP6.41□□□□□ -1.38
SNHG1-208ENST00000538266 PDZRN3Q9UPQ7 1066 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 PCDHB9Q9Y5E1 797 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 NCOA1Q15788 1441 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 ERBINQ96RT1 1412 aa6.41□□□□□ -1.38
SNHG1-208ENST00000538266 GFRA3O60609 400 aa6.4□□□□□ -1.38
SNHG1-208ENST00000538266 ALDH1A1P00352 501 aa6.4□□□□□ -1.38
SNHG1-208ENST00000538266 MCCD1P59942 119 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-208ENST00000538266 TRIM26Q12899 539 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-208ENST00000538266 VASH1Q7L8A9 365 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-208ENST00000538266 MPNDQ8N594 471 aa6.4□□□□□ -1.38
SNHG1-208ENST00000538266 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
SNHG1-208ENST00000538266 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.38
SNHG1-208ENST00000538266 PTPRKQ15262 1439 aa6.4□□□□□ -1.39
SNHG1-208ENST00000538266 AGLP35573 1532 aa6.4□□□□□ -1.39
SNHG1-208ENST00000538266 EIF2AK4Q9P2K8 1649 aaKnown RBP6.39□□□□□ -1.39
SNHG1-208ENST00000538266 GCC2Q8IWJ2 1684 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 POM121CA8CG34 1229 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 PRR20EP86478 221 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 PRR20CP86479 221 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 PRR20DP86480 221 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 PRR20BP86481 221 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 PRR20AP86496 221 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 TRMT44Q8IYL2 757 aaKnown RBP6.39□□□□□ -1.39
SNHG1-208ENST00000538266 SLC10A4Q96EP9 437 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 ESF1Q9H501 851 aaKnown RBP6.39□□□□□ -1.39
SNHG1-208ENST00000538266 TOR4AQ9NXH8 423 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 DHX29Q7Z478 1369 aaKnown RBP6.39□□□□□ -1.39
SNHG1-208ENST00000538266 HFM1A2PYH4 1435 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 ANKRD50Q9ULJ7 1429 aa6.39□□□□□ -1.39
SNHG1-208ENST00000538266 J3QL48 77 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 KIF3BO15066 747 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 GRM5P41594 1212 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 MLECQ14165 292 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 HDGFL1Q5TGJ6 251 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 ZNF592Q92610 1267 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 CDV3Q9UKY7 258 aaKnown RBP6.38□□□□□ -1.39
SNHG1-208ENST00000538266 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 WASF2Q9Y6W5 498 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 SIGLEC1Q9BZZ2 1709 aa6.38□□□□□ -1.39
SNHG1-208ENST00000538266 BCORL1Q5H9F3 1711 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 RNF17Q9BXT8 1623 aaKnown RBP6.37□□□□□ -1.39
SNHG1-208ENST00000538266 NAIPQ13075 1403 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 KANK1Q14678 1352 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 SOX11P35716 441 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 GGT6Q6P531 493 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 KCTD15Q96SI1 283 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-208ENST00000538266 ALG2Q9H553 416 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
SNHG1-208ENST00000538266 FER1L4A9Z1Z3 1794 aa6.36□□□□□ -1.39
SNHG1-208ENST00000538266 GIGYF1O75420 1035 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-208ENST00000538266 NBPF20Q3BBV1 942 aa6.36□□□□□ -1.39
SNHG1-208ENST00000538266 MAP4K5Q9Y4K4 846 aa6.36□□□□□ -1.39
SNHG1-208ENST00000538266 PRDM15P57071 1507 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-208ENST00000538266 KDM5DQ9BY66 1539 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 FAM135AQ9P2D6 1515 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 SETD5Q9C0A6 1442 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 ACIN1Q9UKV3 1341 aaKnown RBP6.35□□□□□ -1.39
SNHG1-208ENST00000538266 WASHC2CQ9Y4E1 1318 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 ADH1CP00326 375 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 SMPD1P17405 629 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 NR5A1Q13285 461 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
SNHG1-208ENST00000538266 IRX2Q9BZI1 471 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-208ENST00000538266 ZC3H13Q5T200 1668 aaKnown RBP6.35□□□□□ -1.39
SNHG1-208ENST00000538266 DEPDC5O75140 1603 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 MADDQ8WXG6 1647 aa6.35□□□□□ -1.39
SNHG1-208ENST00000538266 UNC13BO14795 1591 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms