RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TNNT2P45379 298 aaPredicted RBP7.19□□□□□ -1.26
CHD4-206ENST00000536999 KLHL40Q2TBA0 621 aa7.19□□□□□ -1.26
CHD4-206ENST00000536999 ATF7IPQ6VMQ6 1270 aa7.19□□□□□ -1.26
CHD4-206ENST00000536999 STK32BQ9NY57 414 aa7.19□□□□□ -1.26
CHD4-206ENST00000536999 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
CHD4-206ENST00000536999 CDC42BPGQ6DT37 1551 aa7.19□□□□□ -1.26
CHD4-206ENST00000536999 NRAPQ86VF7 1730 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 GOLGB1Q14789 3259 aaKnown RBP7.18□□□□□ -1.26
CHD4-206ENST00000536999 EPB41L2O43491 1005 aaKnown RBP7.18□□□□□ -1.26
CHD4-206ENST00000536999 MBD3O95983 291 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 HMGN5P82970 282 aaKnown RBP7.18□□□□□ -1.26
CHD4-206ENST00000536999 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 RABEP1Q15276 862 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 TCP11L2Q8N4U5 519 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 WWC3Q9ULE0 1092 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 EVC2Q86UK5 1308 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 MAP3K5Q99683 1374 aa7.18□□□□□ -1.26
CHD4-206ENST00000536999 ST18O60284 1047 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 GRIN3BO60391 1043 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 OFD1O75665 1012 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 LETM1O95202 739 aaPredicted RBP7.17□□□□□ -1.26
CHD4-206ENST00000536999 NASPP49321 788 aaPredicted RBP7.17□□□□□ -1.26
CHD4-206ENST00000536999 ZNF445P59923 1031 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 NUCB1Q02818 461 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 MKRN4PQ13434 485 aaPredicted RBP7.17□□□□□ -1.26
CHD4-206ENST00000536999 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 PKNOX2Q96KN3 472 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 ZBTB12Q9Y330 459 aaPredicted RBP7.17□□□□□ -1.26
CHD4-206ENST00000536999 SPATA31A1Q5TZJ5 1347 aa7.17□□□□□ -1.26
CHD4-206ENST00000536999 K7ELQ4 463 aaPredicted RBP7.16□□□□□ -1.26
CHD4-206ENST00000536999 TPM3P06753 285 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 CCDC146Q8IYE0 955 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 PANK1Q8TE04 598 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 SMC4Q9NTJ3 1288 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 CCDC39Q9UFE4 941 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 AATKQ6ZMQ8 1374 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 KIF1AQ12756 1690 aa7.16□□□□□ -1.26
CHD4-206ENST00000536999 COL14A1Q05707 1796 aaKnown RBP7.15□□□□□ -1.26
CHD4-206ENST00000536999 DYNC1I1O14576 645 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 PLSCR1O15162 318 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 VGFO15240 615 aaPredicted RBP7.15□□□□□ -1.26
CHD4-206ENST00000536999 REC8O95072 547 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 DDIT3P35638 169 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
CHD4-206ENST00000536999 CHD1LQ86WJ1 897 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 DNAJC5GQ8N7S2 189 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 SGIP1Q9BQI5 828 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 CHMP4AQ9BY43 222 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 API5Q9BZZ5 524 aaKnown RBP7.15□□□□□ -1.26
CHD4-206ENST00000536999 RRAGDQ9NQL2 400 aaPredicted RBP7.15□□□□□ -1.26
CHD4-206ENST00000536999 PRDM11Q9NQV5 511 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 PCDHB15Q9Y5E8 787 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 SBNO1A3KN83 1393 aa7.15□□□□□ -1.26
CHD4-206ENST00000536999 ABCA3Q99758 1704 aa7.15□□□□□ -1.27
CHD4-206ENST00000536999 ZNF500O60304 480 aaPredicted RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 CDC45O75419 566 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 FCHSD2O94868 740 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 U2AF1L5P0DN76 240 aaPredicted RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 MCCP23508 829 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 U2AF1Q01081 240 aaKnown RBP eCLIP7.14□□□□□ -1.27
CHD4-206ENST00000536999 SLC15A2Q16348 729 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 INTS3Q68E01 1043 aaKnown RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 C14orf93Q9H972 538 aaKnown RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 ZBTB40Q9NUA8 1239 aa7.14□□□□□ -1.27
CHD4-206ENST00000536999 NOL7Q9UMY1 257 aaKnown RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 DDX49Q9Y6V7 483 aaKnown RBP7.14□□□□□ -1.27
CHD4-206ENST00000536999 NRXN1Q9ULB1 1477 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 TECPR2O15040 1411 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 UVSSAQ2YD98 709 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 ITPRIPQ8IWB1 547 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 TNPO1Q92973 898 aaKnown RBP7.13□□□□□ -1.27
CHD4-206ENST00000536999 PRIMPOLQ96LW4 560 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 PHF8Q9UPP1 1060 aa7.13□□□□□ -1.27
CHD4-206ENST00000536999 SEC24BO95487 1268 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 POLD1P28340 1107 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 MTHFSP49914 203 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 EVA1CP58658 441 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 GNAI1P63096 354 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 TAF3Q5VWG9 929 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 BARGINQ6ZT62 677 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 VSIG10Q8N0Z9 540 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 KLRG1Q96E93 195 aa7.12□□□□□ -1.27
CHD4-206ENST00000536999 OVOS2A0A0G2JMS6 1433 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 OVOS2A0A0J9YW53 1432 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 OVOS2Q6IE36 1432 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 PPIP5K1Q6PFW1 1433 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 NSD3Q9BZ95 1437 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 RGPD3A6NKT7 1758 aaPredicted RBP7.11□□□□□ -1.27
CHD4-206ENST00000536999 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 HMMRO75330 724 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 YBX3P16989 372 aaKnown RBP eCLIP7.11□□□□□ -1.273e-8■□□□□ 9.1
CHD4-206ENST00000536999 KIAA2012Q0VF49 1180 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 CHAF1AQ13111 956 aaPredicted RBP7.11□□□□□ -1.27
CHD4-206ENST00000536999 HDGFL2Q7Z4V5 671 aaPredicted RBP7.11□□□□□ -1.27
CHD4-206ENST00000536999 RPAP2Q8IXW5 612 aaPredicted RBP7.11□□□□□ -1.27
CHD4-206ENST00000536999 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms