RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ARID3AQ99856 593 aa22.03■■□□□ 1.12
RAB40C-203ENST00000535977 ZHX1Q9UKY1 873 aaPredicted RBP22.03■■□□□ 1.12
RAB40C-203ENST00000535977 HOXC9P31274 260 aa22.03■■□□□ 1.12
RAB40C-203ENST00000535977 FOXO3O43524 673 aa22.02■■□□□ 1.12
RAB40C-203ENST00000535977 KCNA6P17658 529 aa22.02■■□□□ 1.12
RAB40C-203ENST00000535977 DDIT3P35638 169 aa22.02■■□□□ 1.12
RAB40C-203ENST00000535977 CCDC30Q5VVM6 783 aa22.02■■□□□ 1.12
RAB40C-203ENST00000535977 CEP170BQ9Y4F5 1589 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-203ENST00000535977 CASC1Q6TDU7 716 aa22.01■■□□□ 1.11
RAB40C-203ENST00000535977 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-203ENST00000535977 KIF2CQ99661 725 aa22.01■■□□□ 1.11
RAB40C-203ENST00000535977 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
RAB40C-203ENST00000535977 GSPT1P15170 499 aaKnown RBP22■■□□□ 1.11
RAB40C-203ENST00000535977 TNPO1Q92973 898 aaKnown RBP22■■□□□ 1.11
RAB40C-203ENST00000535977 MEIS3Q99687 375 aa22■■□□□ 1.11
RAB40C-203ENST00000535977 PRDM10Q9NQV6 1147 aa22■■□□□ 1.11
RAB40C-203ENST00000535977 LRRC37A3O60309 1634 aa22■■□□□ 1.11
RAB40C-203ENST00000535977 NASPP49321 788 aaPredicted RBP22■■□□□ 1.11
RAB40C-203ENST00000535977 HSPA2P54652 639 aa22■■□□□ 1.11
RAB40C-203ENST00000535977 ABTB2Q8N961 1025 aa21.99■■□□□ 1.11
RAB40C-203ENST00000535977 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
RAB40C-203ENST00000535977 CACNA1FO60840 1977 aa21.98■■□□□ 1.11
RAB40C-203ENST00000535977 MAP3K5Q99683 1374 aa21.98■■□□□ 1.11
RAB40C-203ENST00000535977 UQCRHLA0A096LP55 91 aa21.98■■□□□ 1.11
RAB40C-203ENST00000535977 UQCRHP07919 91 aa21.98■■□□□ 1.11
RAB40C-203ENST00000535977 CHMP4AQ9BY43 222 aa21.98■■□□□ 1.11
RAB40C-203ENST00000535977 K7ELQ4 463 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-203ENST00000535977 GNAI2P04899 355 aa21.97■■□□□ 1.11
RAB40C-203ENST00000535977 GNAI3P08754 354 aa21.97■■□□□ 1.11
RAB40C-203ENST00000535977 PTMSP20962 102 aa21.97■■□□□ 1.11
RAB40C-203ENST00000535977 TAF7Q15545 349 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-203ENST00000535977 SKOR2Q2VWA4 1001 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-203ENST00000535977 RABEP1Q15276 862 aa21.96■■□□□ 1.11
RAB40C-203ENST00000535977 OSBPL3Q9H4L5 887 aa21.96■■□□□ 1.11
RAB40C-203ENST00000535977 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
RAB40C-203ENST00000535977 NWD1Q149M9 1564 aa21.95■■□□□ 1.1
RAB40C-203ENST00000535977 SLC4A10Q6U841 1118 aa21.95■■□□□ 1.1
RAB40C-203ENST00000535977 G2E3Q7L622 706 aa21.95■■□□□ 1.1
RAB40C-203ENST00000535977 PHF8Q9UPP1 1060 aa21.95■■□□□ 1.1
RAB40C-203ENST00000535977 ANP32BQ92688 251 aaKnown RBP21.94■■□□□ 1.1
RAB40C-203ENST00000535977 GBP4Q96PP9 640 aa21.94■■□□□ 1.1
RAB40C-203ENST00000535977 PDE4CQ08493 712 aa21.94■■□□□ 1.1
RAB40C-203ENST00000535977 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
RAB40C-203ENST00000535977 FLIIQ13045 1269 aa21.93■■□□□ 1.1
RAB40C-203ENST00000535977 C16orf71Q8IYS4 520 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-203ENST00000535977 SETD1BQ9UPS6 1966 aaKnown RBP21.93■■□□□ 1.1
RAB40C-203ENST00000535977 MTERF4Q7Z6M4 381 aaKnown RBP21.93■■□□□ 1.1
RAB40C-203ENST00000535977 USP26Q9BXU7 913 aa21.93■■□□□ 1.1
RAB40C-203ENST00000535977 IP6K1Q92551 441 aa21.92■■□□□ 1.1
RAB40C-203ENST00000535977 REC8O95072 547 aa21.92■■□□□ 1.1
RAB40C-203ENST00000535977 SDSP20132 328 aa21.92■■□□□ 1.1
RAB40C-203ENST00000535977 IL17REQ8NFR9 667 aa21.91■■□□□ 1.1
RAB40C-203ENST00000535977 PXDNLA1KZ92 1463 aa21.91■■□□□ 1.1
RAB40C-203ENST00000535977 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
RAB40C-203ENST00000535977 F6X3S4 739 aa21.91■■□□□ 1.1
RAB40C-203ENST00000535977 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-203ENST00000535977 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-203ENST00000535977 RAB3GAP1Q15042 981 aa21.91■■□□□ 1.1
RAB40C-203ENST00000535977 KCNH5Q8NCM2 988 aa21.9■■□□□ 1.1
RAB40C-203ENST00000535977 DMTNQ08495 405 aa21.9■■□□□ 1.1
RAB40C-203ENST00000535977 UTP14CQ5TAP6 766 aaKnown RBP21.89■■□□□ 1.1
RAB40C-203ENST00000535977 FAM208AQ9UK61 1670 aaKnown RBP21.89■■□□□ 1.09
RAB40C-203ENST00000535977 DYNC1I1O14576 645 aa21.89■■□□□ 1.09
RAB40C-203ENST00000535977 ATP8B2P98198 1209 aa21.89■■□□□ 1.09
RAB40C-203ENST00000535977 NUTM2GQ5VZR2 741 aa21.89■■□□□ 1.09
RAB40C-203ENST00000535977 ZNF500O60304 480 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-203ENST00000535977 SMARCA5O60264 1052 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-203ENST00000535977 HOXB7P09629 217 aa21.87■■□□□ 1.09
RAB40C-203ENST00000535977 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.87■■□□□ 1.09
RAB40C-203ENST00000535977 NOL7Q9UMY1 257 aaKnown RBP21.87■■□□□ 1.09
RAB40C-203ENST00000535977 PDE1AP54750 535 aa21.87■■□□□ 1.09
RAB40C-203ENST00000535977 OTUD7AQ8TE49 926 aaPredicted RBP21.87■■□□□ 1.09
RAB40C-203ENST00000535977 C14orf37Q86TY3 774 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 LRRCC1Q9C099 1032 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 SRCIN1Q9C0H9 1055 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 N4BP2Q86UW6 1770 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-203ENST00000535977 CEMIPQ8WUJ3 1361 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 ERC2O15083 957 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 HS1BP3Q53T59 392 aa21.86■■□□□ 1.09
RAB40C-203ENST00000535977 LTV1Q96GA3 475 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-203ENST00000535977 APBB1O00213 710 aa21.85■■□□□ 1.09
RAB40C-203ENST00000535977 CLEC17AQ6ZS10 378 aa21.85■■□□□ 1.09
RAB40C-203ENST00000535977 ADGRL3Q9HAR2 1447 aa21.84■■□□□ 1.09
RAB40C-203ENST00000535977 CD2BP2O95400 341 aaKnown RBP21.84■■□□□ 1.09
RAB40C-203ENST00000535977 ZSCAN20P17040 1043 aaPredicted RBP21.84■■□□□ 1.09
RAB40C-203ENST00000535977 RBM42Q9BTD8 480 aaKnown RBP21.84■■□□□ 1.09
RAB40C-203ENST00000535977 PSME1Q06323 249 aa21.84■■□□□ 1.09
RAB40C-203ENST00000535977 LTN1O94822 1766 aa21.83■■□□□ 1.09
RAB40C-203ENST00000535977 NFAT5O94916 1531 aa21.83■■□□□ 1.09
RAB40C-203ENST00000535977 ST18O60284 1047 aa21.83■■□□□ 1.09
RAB40C-203ENST00000535977 CCDC94Q9BW85 323 aaPredicted RBP21.83■■□□□ 1.09
RAB40C-203ENST00000535977 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.08
RAB40C-203ENST00000535977 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.08
RAB40C-203ENST00000535977 BBXQ8WY36 941 aaPredicted RBP21.83■■□□□ 1.08
RAB40C-203ENST00000535977 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
RAB40C-203ENST00000535977 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
RAB40C-203ENST00000535977 IBTKQ9P2D0 1353 aaPredicted RBP21.81■■□□□ 1.08
RAB40C-203ENST00000535977 AOX1Q06278 1338 aa21.81■■□□□ 1.08
RAB40C-203ENST00000535977 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
RAB40C-203ENST00000535977 GOLGA6L22H0YM25 854 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms