RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FBXO41Q8TF61 875 aa29.52■■■□□ 2.32
RBFOX1-206ENST00000535565 VAMP4O75379 141 aa29.51■■■□□ 2.31
RBFOX1-206ENST00000535565 BCAR3O75815 825 aa29.51■■■□□ 2.31
RBFOX1-206ENST00000535565 FKBP8Q14318 412 aa29.51■■■□□ 2.31
RBFOX1-206ENST00000535565 TSPYL6Q8N831 410 aa29.51■■■□□ 2.31
RBFOX1-206ENST00000535565 DDB1Q16531 1140 aa29.5■■■□□ 2.31
RBFOX1-206ENST00000535565 ELL2O00472 640 aaPredicted RBP29.49■■■□□ 2.31
RBFOX1-206ENST00000535565 ALDH1L2Q3SY69 923 aa29.49■■■□□ 2.31
RBFOX1-206ENST00000535565 ERVV-2B6SEH9 535 aa29.48■■■□□ 2.31
RBFOX1-206ENST00000535565 CABP4P57796 275 aa29.48■■■□□ 2.31
RBFOX1-206ENST00000535565 SMC4Q9NTJ3 1288 aa29.47■■■□□ 2.31
RBFOX1-206ENST00000535565 TOGARAM1Q9Y4F4 1720 aa29.47■■■□□ 2.31
RBFOX1-206ENST00000535565 SOS1Q07889 1333 aaPredicted RBP29.47■■■□□ 2.31
RBFOX1-206ENST00000535565 NFATC2IPQ8NCF5 419 aa29.47■■■□□ 2.31
RBFOX1-206ENST00000535565 IRX6P78412 446 aaPredicted RBP29.46■■■□□ 2.31
RBFOX1-206ENST00000535565 FAM98CQ17RN3 349 aaKnown RBP29.46■■■□□ 2.31
RBFOX1-206ENST00000535565 TRPC5Q9UL62 973 aaPredicted RBP29.46■■■□□ 2.31
RBFOX1-206ENST00000535565 ATRNO75882 1429 aa29.46■■■□□ 2.31
RBFOX1-206ENST00000535565 KRT24Q2M2I5 525 aa29.45■■■□□ 2.31
RBFOX1-206ENST00000535565 SSH1Q8WYL5 1049 aa29.45■■■□□ 2.31
RBFOX1-206ENST00000535565 BCL2L13Q9BXK5 485 aa29.45■■■□□ 2.31
RBFOX1-206ENST00000535565 PLIN1O60240 522 aa29.44■■■□□ 2.3
RBFOX1-206ENST00000535565 CANXP27824 592 aaKnown RBP29.44■■■□□ 2.3
RBFOX1-206ENST00000535565 GLI3P10071 1580 aa29.44■■■□□ 2.3
RBFOX1-206ENST00000535565 THSD7AQ9UPZ6 1657 aa29.43■■■□□ 2.3
RBFOX1-206ENST00000535565 GJD4Q96KN9 370 aaPredicted RBP29.43■■■□□ 2.3
RBFOX1-206ENST00000535565 ITGB4P16144 1822 aa29.42■■■□□ 2.3
RBFOX1-206ENST00000535565 EIF4A1P60842 406 aaKnown RBP29.42■■■□□ 2.3
RBFOX1-206ENST00000535565 KIF16BQ96L93 1317 aa29.41■■■□□ 2.3
RBFOX1-206ENST00000535565 FRAT1Q92837 279 aaPredicted RBP29.4■■■□□ 2.3
RBFOX1-206ENST00000535565 DOT1LQ8TEK3 1739 aa29.4■■■□□ 2.3
RBFOX1-206ENST00000535565 ZNF790Q6PG37 636 aa29.39■■■□□ 2.3
RBFOX1-206ENST00000535565 TTC5Q8N0Z6 440 aa29.39■■■□□ 2.3
RBFOX1-206ENST00000535565 PAPPAQ13219 1627 aa29.39■■■□□ 2.3
RBFOX1-206ENST00000535565 A0A0G2JS52 829 aa29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 KCNQ3O43525 872 aa29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 HOXB7P09629 217 aa29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 BRPF1P55201 1214 aaPredicted RBP29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 MYT1Q01538 1121 aa29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 ERICH6BQ5W0A0 696 aa29.39■■■□□ 2.29
RBFOX1-206ENST00000535565 CHMP4AQ9BY43 222 aa29.38■■■□□ 2.29
RBFOX1-206ENST00000535565 CACNA1FO60840 1977 aa29.38■■■□□ 2.29
RBFOX1-206ENST00000535565 TMOD3Q9NYL9 352 aa29.37■■■□□ 2.29
RBFOX1-206ENST00000535565 QTRT2Q9H974 415 aaKnown RBP29.36■■■□□ 2.29
RBFOX1-206ENST00000535565 KAT6BQ8WYB5 2073 aa29.36■■■□□ 2.29
RBFOX1-206ENST00000535565 UBR2Q8IWV8 1755 aa29.35■■■□□ 2.29
RBFOX1-206ENST00000535565 SLC39A6Q13433 755 aa29.35■■■□□ 2.29
RBFOX1-206ENST00000535565 IPO8O15397 1037 aaKnown RBP29.35■■■□□ 2.29
RBFOX1-206ENST00000535565 ZKSCAN2Q63HK3 967 aa29.35■■■□□ 2.29
RBFOX1-206ENST00000535565 MRPL50Q8N5N7 158 aaKnown RBP29.35■■■□□ 2.29
RBFOX1-206ENST00000535565 CCDC30Q5VVM6 783 aa29.34■■■□□ 2.29
RBFOX1-206ENST00000535565 MARCH10Q8NA82 808 aaPredicted RBP29.34■■■□□ 2.29
RBFOX1-206ENST00000535565 HEG1Q9ULI3 1381 aa29.34■■■□□ 2.29
RBFOX1-206ENST00000535565 PDE3AQ14432 1141 aa29.33■■■□□ 2.29
RBFOX1-206ENST00000535565 TCERG1O14776 1098 aaKnown RBP29.32■■■□□ 2.28
RBFOX1-206ENST00000535565 MS4A1P11836 297 aa29.32■■■□□ 2.28
RBFOX1-206ENST00000535565 ZNF772Q68DY9 489 aaPredicted RBP29.32■■■□□ 2.28
RBFOX1-206ENST00000535565 STK31Q9BXU1 1019 aa29.32■■■□□ 2.28
RBFOX1-206ENST00000535565 FMNL2Q96PY5 1086 aa29.31■■■□□ 2.28
RBFOX1-206ENST00000535565 NOB1Q9ULX3 412 aaKnown RBP29.31■■■□□ 2.28
RBFOX1-206ENST00000535565 HDGFL1Q5TGJ6 251 aa29.3■■■□□ 2.28
RBFOX1-206ENST00000535565 C5P01031 1676 aa29.3■■■□□ 2.28
RBFOX1-206ENST00000535565 GIGYF1O75420 1035 aaPredicted RBP29.3■■■□□ 2.28
RBFOX1-206ENST00000535565 C20orf194Q5TEA3 1177 aa29.3■■■□□ 2.28
RBFOX1-206ENST00000535565 ONECUT3O60422 494 aaPredicted RBP29.29■■■□□ 2.28
RBFOX1-206ENST00000535565 BCL9O00512 1426 aa29.28■■■□□ 2.28
RBFOX1-206ENST00000535565 ATF7IPQ6VMQ6 1270 aa29.28■■■□□ 2.28
RBFOX1-206ENST00000535565 LAMB4A4D0S4 1761 aa29.28■■■□□ 2.28
RBFOX1-206ENST00000535565 PIGBQ92521 554 aa29.27■■■□□ 2.28
RBFOX1-206ENST00000535565 ARHGAP45Q92619 1136 aa29.27■■■□□ 2.28
RBFOX1-206ENST00000535565 ZNF496Q96IT1 587 aaPredicted RBP29.27■■■□□ 2.28
RBFOX1-206ENST00000535565 SLC4A2P04920 1241 aa29.26■■■□□ 2.28
RBFOX1-206ENST00000535565 FTSJ3Q8IY81 847 aaKnown RBP29.26■■■□□ 2.28
RBFOX1-206ENST00000535565 SYTL4Q96C24 671 aaPredicted RBP29.26■■■□□ 2.28
RBFOX1-206ENST00000535565 KCPQ6ZWJ8 1503 aa29.26■■■□□ 2.27
RBFOX1-206ENST00000535565 EIF2S2P20042 333 aaKnown RBP29.26■■■□□ 2.27
RBFOX1-206ENST00000535565 SNRPA1P09661 255 aaKnown RBP29.25■■■□□ 2.27
RBFOX1-206ENST00000535565 PRIM1P49642 420 aaKnown RBP29.25■■■□□ 2.27
RBFOX1-206ENST00000535565 DZIP1LQ8IYY4 767 aaKnown RBP29.25■■■□□ 2.27
RBFOX1-206ENST00000535565 NECTIN2Q92692 538 aa29.25■■■□□ 2.27
RBFOX1-206ENST00000535565 CRBNQ96SW2 442 aa29.25■■■□□ 2.27
RBFOX1-206ENST00000535565 TRIM27P14373 513 aa29.24■■■□□ 2.27
RBFOX1-206ENST00000535565 SEPT12Q8IYM1 358 aa29.23■■■□□ 2.27
RBFOX1-206ENST00000535565 EXOC6Q8TAG9 804 aa29.23■■■□□ 2.27
RBFOX1-206ENST00000535565 PTPRCP08575 1304 aa29.23■■■□□ 2.27
RBFOX1-206ENST00000535565 PANK1Q8TE04 598 aa29.22■■■□□ 2.27
RBFOX1-206ENST00000535565 CLUAP1Q96AJ1 413 aa29.22■■■□□ 2.27
RBFOX1-206ENST00000535565 API5Q9BZZ5 524 aaKnown RBP29.22■■■□□ 2.27
RBFOX1-206ENST00000535565 ACSBG1Q96GR2 724 aa29.21■■■□□ 2.27
RBFOX1-206ENST00000535565 PRAMEF22A3QJZ6 481 aa29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 RBM6P78332 1123 aaKnown RBP29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 ATG3Q9NT62 314 aa29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 PPP4R2Q9NY27 417 aa29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 DBF4Q9UBU7 674 aaPredicted RBP29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 ASAP1Q9ULH1 1129 aa29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 TNNQ9UQP3 1299 aa29.19■■■□□ 2.26
RBFOX1-206ENST00000535565 CHPF2Q9P2E5 772 aa29.18■■■□□ 2.26
RBFOX1-206ENST00000535565 PTCD1O75127 700 aaKnown RBP29.18■■■□□ 2.26
RBFOX1-206ENST00000535565 RLBP1P12271 317 aa29.18■■■□□ 2.26
RBFOX1-206ENST00000535565 BRWD3Q6RI45 1802 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms