RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
TDRD3-208ENST00000535286 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
TDRD3-208ENST00000535286 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
TDRD3-208ENST00000535286 ABCC4O15439 1325 aa13.2□□□□□ -0.3
TDRD3-208ENST00000535286 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
TDRD3-208ENST00000535286 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
TDRD3-208ENST00000535286 IL2RBP14784 551 aa13.19□□□□□ -0.3
TDRD3-208ENST00000535286 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
TDRD3-208ENST00000535286 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
TDRD3-208ENST00000535286 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
TDRD3-208ENST00000535286 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
TDRD3-208ENST00000535286 RWDD1Q9H446 243 aaPredicted RBP13.19□□□□□ -0.3
TDRD3-208ENST00000535286 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
TDRD3-208ENST00000535286 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
TDRD3-208ENST00000535286 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
TDRD3-208ENST00000535286 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
TDRD3-208ENST00000535286 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
TDRD3-208ENST00000535286 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
TDRD3-208ENST00000535286 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
TDRD3-208ENST00000535286 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
TDRD3-208ENST00000535286 MRC1P22897 1456 aa13.17□□□□□ -0.3
TDRD3-208ENST00000535286 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
TDRD3-208ENST00000535286 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
TDRD3-208ENST00000535286 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
TDRD3-208ENST00000535286 CYP27B1O15528 508 aa13.16□□□□□ -0.3
TDRD3-208ENST00000535286 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
TDRD3-208ENST00000535286 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
TDRD3-208ENST00000535286 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
TDRD3-208ENST00000535286 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
TDRD3-208ENST00000535286 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
TDRD3-208ENST00000535286 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
TDRD3-208ENST00000535286 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
TDRD3-208ENST00000535286 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
TDRD3-208ENST00000535286 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
TDRD3-208ENST00000535286 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 RGS12O14924 1447 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 CABP4P57796 275 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 FLIIQ13045 1269 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
TDRD3-208ENST00000535286 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
TDRD3-208ENST00000535286 IGHDP01880 384 aa13.12□□□□□ -0.31
TDRD3-208ENST00000535286 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
TDRD3-208ENST00000535286 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
TDRD3-208ENST00000535286 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
TDRD3-208ENST00000535286 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
TDRD3-208ENST00000535286 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
TDRD3-208ENST00000535286 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
TDRD3-208ENST00000535286 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
TDRD3-208ENST00000535286 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
TDRD3-208ENST00000535286 KCNQ3O43525 872 aa13.11□□□□□ -0.31
TDRD3-208ENST00000535286 FKBP5Q13451 457 aaPredicted RBP13.11□□□□□ -0.31
TDRD3-208ENST00000535286 JCADQ9P266 1359 aa13.1□□□□□ -0.31
TDRD3-208ENST00000535286 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
TDRD3-208ENST00000535286 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
TDRD3-208ENST00000535286 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
TDRD3-208ENST00000535286 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
TDRD3-208ENST00000535286 G2E3Q7L622 706 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 NRAPQ86VF7 1730 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
TDRD3-208ENST00000535286 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
TDRD3-208ENST00000535286 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.32
TDRD3-208ENST00000535286 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
TDRD3-208ENST00000535286 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
TDRD3-208ENST00000535286 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
TDRD3-208ENST00000535286 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
TDRD3-208ENST00000535286 EXOC5O00471 708 aa13.07□□□□□ -0.32
TDRD3-208ENST00000535286 SLC4A10Q6U841 1118 aa13.07□□□□□ -0.32
TDRD3-208ENST00000535286 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
TDRD3-208ENST00000535286 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
TDRD3-208ENST00000535286 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 GNAI3P08754 354 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 RPAP2Q8IXW5 612 aaPredicted RBP13.06□□□□□ -0.32
TDRD3-208ENST00000535286 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 SLIT2O94813 1529 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 LRP6O75581 1613 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
TDRD3-208ENST00000535286 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
TDRD3-208ENST00000535286 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
TDRD3-208ENST00000535286 F6X3S4 739 aa13.05□□□□□ -0.32
TDRD3-208ENST00000535286 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
TDRD3-208ENST00000535286 LAMB4A4D0S4 1761 aa13.05□□□□□ -0.32
TDRD3-208ENST00000535286 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
TDRD3-208ENST00000535286 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
TDRD3-208ENST00000535286 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
TDRD3-208ENST00000535286 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 HDAC5Q9UQL6 1122 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 C5P01031 1676 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
TDRD3-208ENST00000535286 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms