RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DYNC1I1O14576 645 aa19.1■□□□□ 0.65
MCF2L-232ENST00000535094 NOLC1Q14978 699 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■■■■ 34
MCF2L-232ENST00000535094 TCEANC2Q96MN5 208 aa19.1■□□□□ 0.65
MCF2L-232ENST00000535094 ATP6V1DQ9Y5K8 247 aa19.1■□□□□ 0.65
MCF2L-232ENST00000535094 HS1BP3Q53T59 392 aa19.1■□□□□ 0.65
MCF2L-232ENST00000535094 RTL1A6NKG5 1358 aa19.1■□□□□ 0.65
MCF2L-232ENST00000535094 JAKMIP1Q96N16 626 aaKnown RBP19.1■□□□□ 0.65
MCF2L-232ENST00000535094 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 CEBPZQ03701 1054 aaKnown RBP19.09■□□□□ 0.65
MCF2L-232ENST00000535094 HDGFL1Q5TGJ6 251 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 SRCIN1Q9C0H9 1055 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 ZNF500O60304 480 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-232ENST00000535094 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 CKAP2LQ8IYA6 745 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 NECAB1Q8N987 351 aa19.09■□□□□ 0.65
MCF2L-232ENST00000535094 BRD1O95696 1058 aa19.08■□□□□ 0.65
MCF2L-232ENST00000535094 CCDC183Q5T5S1 534 aa19.08■□□□□ 0.65
MCF2L-232ENST00000535094 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-232ENST00000535094 PTPRCP08575 1304 aa19.08■□□□□ 0.64
MCF2L-232ENST00000535094 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.64
MCF2L-232ENST00000535094 KIF3AQ9Y496 699 aa19.08■□□□□ 0.64
MCF2L-232ENST00000535094 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.64
MCF2L-232ENST00000535094 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
MCF2L-232ENST00000535094 QRICH2Q9H0J4 1663 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 PRPF40BQ6NWY9 871 aaKnown RBP19.07■□□□□ 0.64
MCF2L-232ENST00000535094 FAM173BQ6P4H8 233 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 USHBP1Q8N6Y0 703 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 STX6O43752 255 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
MCF2L-232ENST00000535094 BICD2Q8TD16 824 aa19.07■□□□□ 0.64
MCF2L-232ENST00000535094 TFIP11Q9UBB9 837 aaKnown RBP19.07■□□□□ 0.64
MCF2L-232ENST00000535094 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
MCF2L-232ENST00000535094 TRIM5Q9C035 493 aa19.06■□□□□ 0.64
MCF2L-232ENST00000535094 CYP2E1P05181 493 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-232ENST00000535094 BRPF1P55201 1214 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-232ENST00000535094 MTHFSDQ2M296 383 aaKnown RBP19.06■□□□□ 0.64
MCF2L-232ENST00000535094 PPP4R3BQ5MIZ7 849 aa19.06■□□□□ 0.64
MCF2L-232ENST00000535094 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-232ENST00000535094 CHL1O00533 1208 aa19.06■□□□□ 0.64
MCF2L-232ENST00000535094 MCM5P33992 734 aa19.06■□□□□ 0.64
MCF2L-232ENST00000535094 MTERF4Q7Z6M4 381 aaKnown RBP19.06■□□□□ 0.64
MCF2L-232ENST00000535094 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 NPHP1O15259 732 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 IFIT2P09913 472 aaKnown RBP19.05■□□□□ 0.64
MCF2L-232ENST00000535094 HSP90B1P14625 803 aaKnown RBP19.05■□□□□ 0.64
MCF2L-232ENST00000535094 NLRP6P59044 892 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 HMGN5P82970 282 aaKnown RBP19.05■□□□□ 0.64
MCF2L-232ENST00000535094 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 PPFIA3O75145 1194 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-232ENST00000535094 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
MCF2L-232ENST00000535094 AK2P54819 239 aa19.04■□□□□ 0.64
MCF2L-232ENST00000535094 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
MCF2L-232ENST00000535094 EFCAB6Q5THR3 1501 aa19.04■□□□□ 0.64
MCF2L-232ENST00000535094 PDLIM2Q96JY6 352 aa19.04■□□□□ 0.64
MCF2L-232ENST00000535094 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.04■□□□□ 0.64
MCF2L-232ENST00000535094 IBTKQ9P2D0 1353 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-232ENST00000535094 SYT1P21579 422 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 GJB2P29033 226 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 FAM69CQ0P6D2 419 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
MCF2L-232ENST00000535094 FAM184AQ8NB25 1140 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 ZSCAN22P10073 491 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-232ENST00000535094 CLEC17AQ6ZS10 378 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 SIL1Q9H173 461 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 PDRG1Q9NUG6 133 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 CHD1O14646 1710 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
MCF2L-232ENST00000535094 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-232ENST00000535094 LIMCH1Q9UPQ0 1083 aa19.02■□□□□ 0.64
MCF2L-232ENST00000535094 ZFYVE9O95405 1425 aa19.02■□□□□ 0.64
MCF2L-232ENST00000535094 LRRC7Q96NW7 1537 aa19.02■□□□□ 0.63
MCF2L-232ENST00000535094 CLASRPQ8N2M8 674 aaKnown RBP19.01■□□□□ 0.63
MCF2L-232ENST00000535094 PDCL2Q8N4E4 241 aa19.01■□□□□ 0.63
MCF2L-232ENST00000535094 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
MCF2L-232ENST00000535094 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
MCF2L-232ENST00000535094 CCDC192P0DO97 292 aa19.01■□□□□ 0.63
MCF2L-232ENST00000535094 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-232ENST00000535094 CYP46A1Q9Y6A2 500 aa19.01■□□□□ 0.63
MCF2L-232ENST00000535094 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
MCF2L-232ENST00000535094 ATP8B2P98198 1209 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 ZRSR1Q15695 479 aaKnown RBP19■□□□□ 0.63
MCF2L-232ENST00000535094 RUFY2Q8WXA3 655 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 ZNF771Q7L3S4 317 aaPredicted RBP19■□□□□ 0.63
MCF2L-232ENST00000535094 ACEP12821 1306 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 H3BQV1 296 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 UBE2HP62256 183 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 IFFO2Q5TF58 517 aa19■□□□□ 0.63
MCF2L-232ENST00000535094 GPATCH3Q96I76 525 aa18.99■□□□□ 0.63
MCF2L-232ENST00000535094 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
MCF2L-232ENST00000535094 TNMDQ9H2S6 317 aa18.98■□□□□ 0.63
MCF2L-232ENST00000535094 GLI2P10070 1586 aa18.98■□□□□ 0.63
MCF2L-232ENST00000535094 TEFQ10587 303 aa18.98■□□□□ 0.63
MCF2L-232ENST00000535094 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
MCF2L-232ENST00000535094 INTS4Q96HW7 963 aaKnown RBP18.97■□□□□ 0.63
MCF2L-232ENST00000535094 GOLGA6L19H0YKK7 550 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms