RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-213ENST00000533717 MRC1P22897 1456 aa20.8■□□□□ 0.92
PSMD13-213ENST00000533717 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
PSMD13-213ENST00000533717 SIPA1L3O60292 1781 aaPredicted RBP20.78■□□□□ 0.92
PSMD13-213ENST00000533717 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
PSMD13-213ENST00000533717 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
PSMD13-213ENST00000533717 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
PSMD13-213ENST00000533717 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
PSMD13-213ENST00000533717 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
PSMD13-213ENST00000533717 LOC102724428A0A0B4J2F2 783 aa20.77■□□□□ 0.92
PSMD13-213ENST00000533717 SIK1P57059 783 aa20.77■□□□□ 0.92
PSMD13-213ENST00000533717 PDGFDQ9GZP0 370 aaPredicted RBP20.77■□□□□ 0.92
PSMD13-213ENST00000533717 PRKRIP1Q9H875 184 aaPredicted RBP20.77■□□□□ 0.92
PSMD13-213ENST00000533717 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.92
PSMD13-213ENST00000533717 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.92
PSMD13-213ENST00000533717 GNAT3A8MTJ3 354 aa20.76■□□□□ 0.91
PSMD13-213ENST00000533717 MSH5O43196 834 aa20.76■□□□□ 0.91
PSMD13-213ENST00000533717 SLC52A2Q9HAB3 445 aa20.76■□□□□ 0.91
PSMD13-213ENST00000533717 SPON1Q9HCB6 807 aa20.75■□□□□ 0.91
PSMD13-213ENST00000533717 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
PSMD13-213ENST00000533717 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
PSMD13-213ENST00000533717 UBR2Q8IWV8 1755 aa20.73■□□□□ 0.91
PSMD13-213ENST00000533717 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
PSMD13-213ENST00000533717 PNPLA7Q6ZV29 1317 aa20.73■□□□□ 0.91
PSMD13-213ENST00000533717 TJP1Q07157 1748 aa20.73■□□□□ 0.91
PSMD13-213ENST00000533717 RBM42Q9BTD8 480 aaKnown RBP20.72■□□□□ 0.91
PSMD13-213ENST00000533717 COL24A1Q17RW2 1714 aa20.72■□□□□ 0.91
PSMD13-213ENST00000533717 ZBTB7AO95365 584 aa20.71■□□□□ 0.91
PSMD13-213ENST00000533717 NEFMP07197 916 aa20.71■□□□□ 0.91
PSMD13-213ENST00000533717 ITPK1Q13572 414 aa20.71■□□□□ 0.91
PSMD13-213ENST00000533717 IL17REQ8NFR9 667 aa20.71■□□□□ 0.91
PSMD13-213ENST00000533717 LINC00116Q8NCU8 138 aa20.7■□□□□ 0.9
PSMD13-213ENST00000533717 MTFR1LQ9H019 292 aa20.7■□□□□ 0.9
PSMD13-213ENST00000533717 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
PSMD13-213ENST00000533717 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
PSMD13-213ENST00000533717 AK7Q96M32 723 aa20.69■□□□□ 0.9
PSMD13-213ENST00000533717 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
PSMD13-213ENST00000533717 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
PSMD13-213ENST00000533717 CEMIPQ8WUJ3 1361 aa20.69■□□□□ 0.9
PSMD13-213ENST00000533717 SRCAPQ6ZRS2 3230 aa20.68■□□□□ 0.9
PSMD13-213ENST00000533717 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
PSMD13-213ENST00000533717 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
PSMD13-213ENST00000533717 TEFQ10587 303 aa20.68■□□□□ 0.9
PSMD13-213ENST00000533717 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
PSMD13-213ENST00000533717 FLAD1Q8NFF5 587 aa20.67■□□□□ 0.9
PSMD13-213ENST00000533717 ATF5Q9Y2D1 282 aaPredicted RBP20.67■□□□□ 0.9
PSMD13-213ENST00000533717 HTATSF1O43719 755 aaKnown RBP20.66■□□□□ 0.9
PSMD13-213ENST00000533717 SLC39A6Q13433 755 aa20.66■□□□□ 0.9
PSMD13-213ENST00000533717 COL23A1Q86Y22 540 aaPredicted RBP20.66■□□□□ 0.9
PSMD13-213ENST00000533717 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
PSMD13-213ENST00000533717 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
PSMD13-213ENST00000533717 PTGER2P43116 358 aa20.64■□□□□ 0.89
PSMD13-213ENST00000533717 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.89
PSMD13-213ENST00000533717 GNPATO15228 680 aa20.63■□□□□ 0.89
PSMD13-213ENST00000533717 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSMD13-213ENST00000533717 RC3H1Q5TC82 1133 aaKnown RBP20.63■□□□□ 0.89
PSMD13-213ENST00000533717 MCM10Q7L590 875 aa20.63■□□□□ 0.89
PSMD13-213ENST00000533717 CNTNAP4Q9C0A0 1308 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 SSFA2P28290 1259 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
PSMD13-213ENST00000533717 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
PSMD13-213ENST00000533717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.61■□□□□ 0.89
PSMD13-213ENST00000533717 PHF14O94880 888 aa20.61■□□□□ 0.89
PSMD13-213ENST00000533717 DCTN1Q14203 1278 aa20.6■□□□□ 0.89
PSMD13-213ENST00000533717 ZNF790Q6PG37 636 aa20.6■□□□□ 0.89
PSMD13-213ENST00000533717 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
PSMD13-213ENST00000533717 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
PSMD13-213ENST00000533717 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
PSMD13-213ENST00000533717 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
PSMD13-213ENST00000533717 KDM3BQ7LBC6 1761 aa20.59■□□□□ 0.89
PSMD13-213ENST00000533717 ANP32CO43423 234 aa20.58■□□□□ 0.89
PSMD13-213ENST00000533717 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
PSMD13-213ENST00000533717 DNAJC10Q8IXB1 793 aa20.58■□□□□ 0.89
PSMD13-213ENST00000533717 ADAMTS8Q9UP79 889 aa20.58■□□□□ 0.89
PSMD13-213ENST00000533717 RPS6KA4O75676 772 aa20.57■□□□□ 0.88
PSMD13-213ENST00000533717 ADRA2BP18089 450 aa20.56■□□□□ 0.88
PSMD13-213ENST00000533717 POLD1P28340 1107 aa20.56■□□□□ 0.88
PSMD13-213ENST00000533717 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
PSMD13-213ENST00000533717 ZNF496Q96IT1 587 aaPredicted RBP20.56■□□□□ 0.88
PSMD13-213ENST00000533717 ARXQ96QS3 562 aa20.56■□□□□ 0.88
PSMD13-213ENST00000533717 HEG1Q9ULI3 1381 aa20.56■□□□□ 0.88
PSMD13-213ENST00000533717 CYP19A1P11511 503 aaPredicted RBP20.55■□□□□ 0.88
PSMD13-213ENST00000533717 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
PSMD13-213ENST00000533717 TRAPPC3LQ5T215 181 aa20.55■□□□□ 0.88
PSMD13-213ENST00000533717 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
PSMD13-213ENST00000533717 FMNL2Q96PY5 1086 aa20.55■□□□□ 0.88
PSMD13-213ENST00000533717 TMPOP42166 694 aaKnown RBP20.54■□□□□ 0.88
PSMD13-213ENST00000533717 RIPK4P57078 832 aa20.54■□□□□ 0.88
PSMD13-213ENST00000533717 MSL1Q68DK7 614 aa20.54■□□□□ 0.88
PSMD13-213ENST00000533717 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
PSMD13-213ENST00000533717 CCDC87Q9NVE4 849 aa20.54■□□□□ 0.88
PSMD13-213ENST00000533717 KCNQ3O43525 872 aa20.53■□□□□ 0.88
PSMD13-213ENST00000533717 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
PSMD13-213ENST00000533717 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
PSMD13-213ENST00000533717 ARHGEF1Q92888 912 aaKnown RBP20.52■□□□□ 0.88
PSMD13-213ENST00000533717 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
PSMD13-213ENST00000533717 STARD3NLO95772 234 aa20.51■□□□□ 0.87
PSMD13-213ENST00000533717 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms