RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
SF3B2-211ENST00000531041 WWC1Q8IX03 1113 aa22.2■■□□□ 1.14
SF3B2-211ENST00000531041 PIGBQ92521 554 aa22.2■■□□□ 1.14
SF3B2-211ENST00000531041 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
SF3B2-211ENST00000531041 LY75O60449 1722 aa22.19■■□□□ 1.14
SF3B2-211ENST00000531041 RGPD3A6NKT7 1758 aaPredicted RBP22.19■■□□□ 1.14
SF3B2-211ENST00000531041 RGPD4Q7Z3J3 1758 aa22.19■■□□□ 1.14
SF3B2-211ENST00000531041 PTF1AQ7RTS3 328 aa22.19■■□□□ 1.14
SF3B2-211ENST00000531041 UBR2Q8IWV8 1755 aa22.19■■□□□ 1.14
SF3B2-211ENST00000531041 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
SF3B2-211ENST00000531041 TAF7Q15545 349 aaPredicted RBP22.17■■□□□ 1.14
SF3B2-211ENST00000531041 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
SF3B2-211ENST00000531041 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
SF3B2-211ENST00000531041 HNRNPUQ00839 825 aaKnown RBP eCLIP22.14■■□□□ 1.14
SF3B2-211ENST00000531041 WDR63Q8IWG1 891 aa22.14■■□□□ 1.14
SF3B2-211ENST00000531041 ZNF521Q96K83 1311 aa22.14■■□□□ 1.14
SF3B2-211ENST00000531041 ZNF831Q5JPB2 1677 aa22.13■■□□□ 1.13
SF3B2-211ENST00000531041 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
SF3B2-211ENST00000531041 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
SF3B2-211ENST00000531041 IL16Q14005 1332 aa22.12■■□□□ 1.13
SF3B2-211ENST00000531041 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.13
SF3B2-211ENST00000531041 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
SF3B2-211ENST00000531041 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
SF3B2-211ENST00000531041 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
SF3B2-211ENST00000531041 PLSCR1O15162 318 aa22.11■■□□□ 1.13
SF3B2-211ENST00000531041 APBA3O96018 575 aa22.11■■□□□ 1.13
SF3B2-211ENST00000531041 SF3B2Q13435 895 aaKnown RBP22.11■■□□□ 1.13
SF3B2-211ENST00000531041 CFAP44Q96MT7 982 aa22.11■■□□□ 1.13
SF3B2-211ENST00000531041 TAF1LQ8IZX4 1826 aa22.1■■□□□ 1.13
SF3B2-211ENST00000531041 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
SF3B2-211ENST00000531041 ZNF790Q6PG37 636 aa22.1■■□□□ 1.13
SF3B2-211ENST00000531041 IFT57Q9NWB7 429 aa22.1■■□□□ 1.13
SF3B2-211ENST00000531041 CHL1O00533 1208 aa22.09■■□□□ 1.13
SF3B2-211ENST00000531041 GNAI1P63096 354 aa22.09■■□□□ 1.13
SF3B2-211ENST00000531041 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
SF3B2-211ENST00000531041 KCPQ6ZWJ8 1503 aa22.09■■□□□ 1.13
SF3B2-211ENST00000531041 PALLDQ8WX93 1383 aa22.09■■□□□ 1.13
SF3B2-211ENST00000531041 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
SF3B2-211ENST00000531041 MIS18AQ9NYP9 233 aa22.08■■□□□ 1.13
SF3B2-211ENST00000531041 RREB1Q92766 1687 aa22.07■■□□□ 1.12
SF3B2-211ENST00000531041 TTC5Q8N0Z6 440 aa22.07■■□□□ 1.12
SF3B2-211ENST00000531041 TSPYL4Q9UJ04 414 aa22.07■■□□□ 1.12
SF3B2-211ENST00000531041 LAS1LQ9Y4W2 734 aaKnown RBP22.07■■□□□ 1.12
SF3B2-211ENST00000531041 BAG6P46379 1132 aa22.06■■□□□ 1.12
SF3B2-211ENST00000531041 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
SF3B2-211ENST00000531041 KCNQ3O43525 872 aa22.06■■□□□ 1.12
SF3B2-211ENST00000531041 TJP1Q07157 1748 aa22.06■■□□□ 1.12
SF3B2-211ENST00000531041 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
SF3B2-211ENST00000531041 COL5A3P25940 1745 aaPredicted RBP22.04■■□□□ 1.12
SF3B2-211ENST00000531041 C5P01031 1676 aa22.04■■□□□ 1.12
SF3B2-211ENST00000531041 MBIPQ9NS73 344 aa22.04■■□□□ 1.12
SF3B2-211ENST00000531041 LOC102724428A0A0B4J2F2 783 aa22.03■■□□□ 1.12
SF3B2-211ENST00000531041 PTCD1O75127 700 aaKnown RBP22.03■■□□□ 1.12
SF3B2-211ENST00000531041 SIK1P57059 783 aa22.03■■□□□ 1.12
SF3B2-211ENST00000531041 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
SF3B2-211ENST00000531041 FMNL2Q96PY5 1086 aa22.03■■□□□ 1.12
SF3B2-211ENST00000531041 CAMKK2Q96RR4 588 aa22.03■■□□□ 1.12
SF3B2-211ENST00000531041 SPINK5Q9NQ38 1064 aaPredicted RBP22.03■■□□□ 1.12
SF3B2-211ENST00000531041 LAMB4A4D0S4 1761 aa22.03■■□□□ 1.12
SF3B2-211ENST00000531041 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
SF3B2-211ENST00000531041 EN1Q05925 392 aaPredicted RBP22.02■■□□□ 1.12
SF3B2-211ENST00000531041 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
SF3B2-211ENST00000531041 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.11
SF3B2-211ENST00000531041 HEG1Q9ULI3 1381 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 TXNRD1Q16881 649 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 SLC27A3Q5K4L6 730 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 VSIG10Q8N0Z9 540 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 PROM2Q8N271 834 aa22.01■■□□□ 1.11
SF3B2-211ENST00000531041 E9PSI1 815 aa22■■□□□ 1.11
SF3B2-211ENST00000531041 SLFN5Q08AF3 891 aa22■■□□□ 1.11
SF3B2-211ENST00000531041 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
SF3B2-211ENST00000531041 MYH16Q9H6N6 1097 aa22■■□□□ 1.11
SF3B2-211ENST00000531041 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
SF3B2-211ENST00000531041 TSR2Q969E8 191 aaKnown RBP21.99■■□□□ 1.11
SF3B2-211ENST00000531041 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
SF3B2-211ENST00000531041 ATP6V1AP38606 617 aa21.98■■□□□ 1.11
SF3B2-211ENST00000531041 FANCIQ9NVI1 1328 aa21.98■■□□□ 1.11
SF3B2-211ENST00000531041 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
SF3B2-211ENST00000531041 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
SF3B2-211ENST00000531041 CDCA7LQ96GN5 454 aa21.97■■□□□ 1.11
SF3B2-211ENST00000531041 LRRC4BQ9NT99 713 aa21.97■■□□□ 1.11
SF3B2-211ENST00000531041 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
SF3B2-211ENST00000531041 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
SF3B2-211ENST00000531041 C4BP0C0L5 1744 aa21.96■■□□□ 1.11
SF3B2-211ENST00000531041 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
SF3B2-211ENST00000531041 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
SF3B2-211ENST00000531041 TEX13AQ9BXU3 409 aaPredicted RBP21.96■■□□□ 1.11
SF3B2-211ENST00000531041 CACNA1FO60840 1977 aa21.95■■□□□ 1.1
SF3B2-211ENST00000531041 KCNQ4P56696 695 aa21.95■■□□□ 1.1
SF3B2-211ENST00000531041 ITPK1Q13572 414 aa21.95■■□□□ 1.1
SF3B2-211ENST00000531041 SOCS7O14512 581 aa21.94■■□□□ 1.1
SF3B2-211ENST00000531041 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
SF3B2-211ENST00000531041 DNAJC10Q8IXB1 793 aa21.93■■□□□ 1.1
SF3B2-211ENST00000531041 UBR3Q6ZT12 1888 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 PRAMEF22A3QJZ6 481 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 HOXB7P09629 217 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 DUSP27Q5VZP5 1158 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 C8orf58Q8NAV2 365 aa21.92■■□□□ 1.1
SF3B2-211ENST00000531041 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms