RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
USP35-201ENST00000526425 FOXD4L5Q5VV16 416 aaPredicted RBP12.08□□□□□ -0.47
USP35-201ENST00000526425 CASC1Q6TDU7 716 aa12.08□□□□□ -0.47
USP35-201ENST00000526425 FOXD4L4Q8WXT5 416 aaPredicted RBP12.08□□□□□ -0.47
USP35-201ENST00000526425 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.47
USP35-201ENST00000526425 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 TSHZ3Q63HK5 1081 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 SBNO1A3KN83 1393 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 KCNJ4P48050 445 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
USP35-201ENST00000526425 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
USP35-201ENST00000526425 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
USP35-201ENST00000526425 HOXC9P31274 260 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 MEIS3Q99687 375 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
USP35-201ENST00000526425 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 USP32Q8NFA0 1604 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 HMMRO75330 724 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 GCP02774 474 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 G2E3Q7L622 706 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 MAP7D2Q96T17 732 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 NPHP3Q7Z494 1330 aa12.07□□□□□ -0.48
USP35-201ENST00000526425 DDX17Q92841 729 aaKnown RBP12.06□□□□□ -0.48
USP35-201ENST00000526425 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
USP35-201ENST00000526425 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
USP35-201ENST00000526425 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
USP35-201ENST00000526425 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
USP35-201ENST00000526425 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
USP35-201ENST00000526425 IL1RAPL2Q9NP60 686 aa12.04□□□□□ -0.48
USP35-201ENST00000526425 MAP4K4O95819 1239 aaPredicted RBP12.04□□□□□ -0.48
USP35-201ENST00000526425 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
USP35-201ENST00000526425 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
USP35-201ENST00000526425 CCDC30Q5VVM6 783 aa12.04□□□□□ -0.48
USP35-201ENST00000526425 ZBTB7BO15156 539 aaPredicted RBP12.03□□□□□ -0.48
USP35-201ENST00000526425 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
USP35-201ENST00000526425 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
USP35-201ENST00000526425 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 IP6K1Q92551 441 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 GCC1Q96CN9 775 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
USP35-201ENST00000526425 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 TSC1Q92574 1164 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 OVOS2A0A0J9YW53 1432 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 OVOS2Q6IE36 1432 aa12.03□□□□□ -0.48
USP35-201ENST00000526425 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
USP35-201ENST00000526425 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.48
USP35-201ENST00000526425 CHRNA2Q15822 529 aa12.02□□□□□ -0.48
USP35-201ENST00000526425 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.48
USP35-201ENST00000526425 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.48
USP35-201ENST00000526425 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
USP35-201ENST00000526425 PRDM11Q9NQV5 511 aa12.02□□□□□ -0.49
USP35-201ENST00000526425 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
USP35-201ENST00000526425 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
USP35-201ENST00000526425 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
USP35-201ENST00000526425 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
USP35-201ENST00000526425 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
USP35-201ENST00000526425 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.49
USP35-201ENST00000526425 MRE11P49959 708 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 NUCB1Q02818 461 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 DMTNQ08495 405 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
USP35-201ENST00000526425 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.01□□□□□ -0.49
USP35-201ENST00000526425 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
USP35-201ENST00000526425 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
USP35-201ENST00000526425 GNAI2P04899 355 aa12□□□□□ -0.49
USP35-201ENST00000526425 FLIIQ13045 1269 aa12□□□□□ -0.49
USP35-201ENST00000526425 TBC1D32Q96NH3 1257 aa12□□□□□ -0.49
USP35-201ENST00000526425 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
USP35-201ENST00000526425 BTBD11A6QL63 1104 aa12□□□□□ -0.49
USP35-201ENST00000526425 MYL6BP14649 208 aa12□□□□□ -0.49
USP35-201ENST00000526425 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
USP35-201ENST00000526425 SMC5Q8IY18 1101 aa12□□□□□ -0.49
USP35-201ENST00000526425 ITSN1Q15811 1721 aa12□□□□□ -0.49
USP35-201ENST00000526425 CDC45O75419 566 aa12□□□□□ -0.49
USP35-201ENST00000526425 EVA1CP58658 441 aa12□□□□□ -0.49
USP35-201ENST00000526425 MPNDQ8N594 471 aa12□□□□□ -0.49
USP35-201ENST00000526425 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
USP35-201ENST00000526425 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 SLAIN2Q9P270 581 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 LRRFIP2Q9Y608 721 aaKnown RBP11.99□□□□□ -0.49
USP35-201ENST00000526425 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 COL3A1P02461 1466 aaPredicted RBP11.99□□□□□ -0.49
USP35-201ENST00000526425 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 CHL1O00533 1208 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 TRAK2O60296 914 aa11.99□□□□□ -0.49
USP35-201ENST00000526425 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
USP35-201ENST00000526425 KIF20BQ96Q89 1820 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
USP35-201ENST00000526425 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms