RNA–Protein interactions for RNA: ENST00000523366.1

ERGIC1-213, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 5

Gene ERGIC1, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-213ENST00000523366 IL17REQ8NFR9 667 aa13.84□□□□□ -0.19
ERGIC1-213ENST00000523366 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
ERGIC1-213ENST00000523366 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
ERGIC1-213ENST00000523366 CABP4P57796 275 aa13.83□□□□□ -0.2
ERGIC1-213ENST00000523366 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.2
ERGIC1-213ENST00000523366 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
ERGIC1-213ENST00000523366 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
ERGIC1-213ENST00000523366 MRC1P22897 1456 aa13.82□□□□□ -0.2
ERGIC1-213ENST00000523366 ITPK1Q13572 414 aa13.82□□□□□ -0.2
ERGIC1-213ENST00000523366 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
ERGIC1-213ENST00000523366 LRP5O75197 1615 aa13.82□□□□□ -0.2
ERGIC1-213ENST00000523366 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 SIK1P57059 783 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 MAP3K5Q99683 1374 aa13.81□□□□□ -0.2
ERGIC1-213ENST00000523366 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
ERGIC1-213ENST00000523366 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
ERGIC1-213ENST00000523366 AMIGO3Q86WK7 504 aa13.8□□□□□ -0.2
ERGIC1-213ENST00000523366 C4BP0C0L5 1744 aa13.8□□□□□ -0.2
ERGIC1-213ENST00000523366 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
ERGIC1-213ENST00000523366 UBR2Q8IWV8 1755 aa13.79□□□□□ -0.2
ERGIC1-213ENST00000523366 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
ERGIC1-213ENST00000523366 SMIM5Q71RC9 77 aa13.79□□□□□ -0.2
ERGIC1-213ENST00000523366 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
ERGIC1-213ENST00000523366 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
ERGIC1-213ENST00000523366 TJP1Q07157 1748 aa13.78□□□□□ -0.2
ERGIC1-213ENST00000523366 CEMIPQ8WUJ3 1361 aa13.78□□□□□ -0.2
ERGIC1-213ENST00000523366 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
ERGIC1-213ENST00000523366 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
ERGIC1-213ENST00000523366 ZBTB7AO95365 584 aa13.77□□□□□ -0.21
ERGIC1-213ENST00000523366 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
ERGIC1-213ENST00000523366 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
ERGIC1-213ENST00000523366 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
ERGIC1-213ENST00000523366 KCPQ6ZWJ8 1503 aa13.76□□□□□ -0.21
ERGIC1-213ENST00000523366 MCM10Q7L590 875 aa13.76□□□□□ -0.21
ERGIC1-213ENST00000523366 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
ERGIC1-213ENST00000523366 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
ERGIC1-213ENST00000523366 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
ERGIC1-213ENST00000523366 CICQ96RK0 1608 aaPredicted RBP13.75□□□□□ -0.21
ERGIC1-213ENST00000523366 ADAMTS8Q9UP79 889 aa13.75□□□□□ -0.21
ERGIC1-213ENST00000523366 KCNQ3O43525 872 aa13.74□□□□□ -0.21
ERGIC1-213ENST00000523366 PTGER2P43116 358 aa13.74□□□□□ -0.21
ERGIC1-213ENST00000523366 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
ERGIC1-213ENST00000523366 SGIP1Q9BQI5 828 aa13.74□□□□□ -0.21
ERGIC1-213ENST00000523366 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
ERGIC1-213ENST00000523366 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
ERGIC1-213ENST00000523366 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
ERGIC1-213ENST00000523366 TEFQ10587 303 aa13.72□□□□□ -0.21
ERGIC1-213ENST00000523366 DNAJC10Q8IXB1 793 aa13.72□□□□□ -0.21
ERGIC1-213ENST00000523366 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
ERGIC1-213ENST00000523366 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.21
ERGIC1-213ENST00000523366 ZNF790Q6PG37 636 aa13.71□□□□□ -0.21
ERGIC1-213ENST00000523366 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
ERGIC1-213ENST00000523366 AK7Q96M32 723 aa13.71□□□□□ -0.21
ERGIC1-213ENST00000523366 MTFR1LQ9H019 292 aa13.71□□□□□ -0.21
ERGIC1-213ENST00000523366 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.22
ERGIC1-213ENST00000523366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
ERGIC1-213ENST00000523366 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 MAPK8IP3Q9UPT6 1336 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 GNPATO15228 680 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 PHF14O94880 888 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 CYP19A1P11511 503 aaPredicted RBP13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 CRKLP46109 303 aaKnown RBP13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 RUNDC1Q96C34 613 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
ERGIC1-213ENST00000523366 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 MSH5O43196 834 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 ANP32CO43423 234 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 SSFA2P28290 1259 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 RIPK4P57078 832 aa13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-213ENST00000523366 NEFMP07197 916 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 FLAD1Q8NFF5 587 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
ERGIC1-213ENST00000523366 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
ERGIC1-213ENST00000523366 TTC5Q8N0Z6 440 aa13.66□□□□□ -0.22
ERGIC1-213ENST00000523366 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
ERGIC1-213ENST00000523366 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
ERGIC1-213ENST00000523366 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
ERGIC1-213ENST00000523366 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-213ENST00000523366 APAF1O14727 1248 aa13.64□□□□□ -0.23
ERGIC1-213ENST00000523366 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
ERGIC1-213ENST00000523366 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
ERGIC1-213ENST00000523366 ARXQ96QS3 562 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms