RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
CLK4-209ENST00000521621 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
CLK4-209ENST00000521621 PRKAR2BP31323 418 aa12.61□□□□□ -0.39
CLK4-209ENST00000521621 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
CLK4-209ENST00000521621 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
CLK4-209ENST00000521621 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
CLK4-209ENST00000521621 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
CLK4-209ENST00000521621 CABP4P57796 275 aa12.6□□□□□ -0.39
CLK4-209ENST00000521621 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLK4-209ENST00000521621 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
CLK4-209ENST00000521621 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
CLK4-209ENST00000521621 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
CLK4-209ENST00000521621 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
CLK4-209ENST00000521621 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
CLK4-209ENST00000521621 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
CLK4-209ENST00000521621 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
CLK4-209ENST00000521621 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.39
CLK4-209ENST00000521621 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.39
CLK4-209ENST00000521621 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.39
CLK4-209ENST00000521621 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
CLK4-209ENST00000521621 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
CLK4-209ENST00000521621 SIK1P57059 783 aa12.58□□□□□ -0.4
CLK4-209ENST00000521621 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
CLK4-209ENST00000521621 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
CLK4-209ENST00000521621 LAMB4A4D0S4 1761 aa12.57□□□□□ -0.4
CLK4-209ENST00000521621 NEFMP07197 916 aa12.57□□□□□ -0.4
CLK4-209ENST00000521621 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
CLK4-209ENST00000521621 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
CLK4-209ENST00000521621 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
CLK4-209ENST00000521621 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
CLK4-209ENST00000521621 ADRA2BP18089 450 aa12.55□□□□□ -0.4
CLK4-209ENST00000521621 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
CLK4-209ENST00000521621 SSFA2P28290 1259 aa12.55□□□□□ -0.4
CLK4-209ENST00000521621 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
CLK4-209ENST00000521621 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
CLK4-209ENST00000521621 LMOD3Q0VAK6 560 aa12.54□□□□□ -0.4
CLK4-209ENST00000521621 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
CLK4-209ENST00000521621 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
CLK4-209ENST00000521621 C4AP0C0L4 1744 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 ANP32CO43423 234 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
CLK4-209ENST00000521621 RGL2O15211 777 aa12.52□□□□□ -0.4
CLK4-209ENST00000521621 ITPK1Q13572 414 aa12.52□□□□□ -0.4
CLK4-209ENST00000521621 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.4
CLK4-209ENST00000521621 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLK4-209ENST00000521621 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.41
CLK4-209ENST00000521621 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
CLK4-209ENST00000521621 TEFQ10587 303 aa12.52□□□□□ -0.41
CLK4-209ENST00000521621 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
CLK4-209ENST00000521621 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
CLK4-209ENST00000521621 PSDA5PKW4 1024 aaPredicted RBP12.51□□□□□ -0.41
CLK4-209ENST00000521621 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
CLK4-209ENST00000521621 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
CLK4-209ENST00000521621 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
CLK4-209ENST00000521621 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
CLK4-209ENST00000521621 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
CLK4-209ENST00000521621 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
CLK4-209ENST00000521621 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
CLK4-209ENST00000521621 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 PTGER2P43116 358 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 AK7Q96M32 723 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
CLK4-209ENST00000521621 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
CLK4-209ENST00000521621 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
CLK4-209ENST00000521621 COL23A1Q86Y22 540 aaPredicted RBP12.48□□□□□ -0.41
CLK4-209ENST00000521621 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
CLK4-209ENST00000521621 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
CLK4-209ENST00000521621 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
CLK4-209ENST00000521621 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
CLK4-209ENST00000521621 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.41
CLK4-209ENST00000521621 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
CLK4-209ENST00000521621 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
CLK4-209ENST00000521621 RTCBQ9Y3I0 505 aaKnown RBP12.46□□□□□ -0.41
CLK4-209ENST00000521621 CCER2I3L3R5 266 aa12.46□□□□□ -0.42
CLK4-209ENST00000521621 RIPK4P57078 832 aa12.46□□□□□ -0.42
CLK4-209ENST00000521621 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.42
CLK4-209ENST00000521621 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.42
CLK4-209ENST00000521621 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
CLK4-209ENST00000521621 STARD3NLO95772 234 aa12.45□□□□□ -0.42
CLK4-209ENST00000521621 CRKLP46109 303 aaKnown RBP12.45□□□□□ -0.42
CLK4-209ENST00000521621 MCM10Q7L590 875 aa12.45□□□□□ -0.42
CLK4-209ENST00000521621 ZNF496Q96IT1 587 aaPredicted RBP12.45□□□□□ -0.42
CLK4-209ENST00000521621 A0A087WZG4 1122 aa12.45□□□□□ -0.42
CLK4-209ENST00000521621 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
CLK4-209ENST00000521621 TRAPPC3LQ5T215 181 aa12.44□□□□□ -0.42
CLK4-209ENST00000521621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
CLK4-209ENST00000521621 IL16Q14005 1332 aa12.44□□□□□ -0.42
CLK4-209ENST00000521621 CHL1O00533 1208 aa12.43□□□□□ -0.42
CLK4-209ENST00000521621 GNPATO15228 680 aa12.43□□□□□ -0.42
CLK4-209ENST00000521621 HOXB7P09629 217 aa12.43□□□□□ -0.42
CLK4-209ENST00000521621 ZNF853P0CG23 659 aa12.43□□□□□ -0.42
CLK4-209ENST00000521621 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms