RNA–Protein interactions for RNA: ENST00000521344.1

PCMTD1-206, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3 BASIC

Gene PCMTD1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-206ENST00000521344 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
PCMTD1-206ENST00000521344 PIGBQ92521 554 aa22.57■■□□□ 1.2
PCMTD1-206ENST00000521344 TRIM37O94972 964 aa22.56■■□□□ 1.2
PCMTD1-206ENST00000521344 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
PCMTD1-206ENST00000521344 ILDR2Q71H61 639 aa22.55■■□□□ 1.2
PCMTD1-206ENST00000521344 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
PCMTD1-206ENST00000521344 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
PCMTD1-206ENST00000521344 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
PCMTD1-206ENST00000521344 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
PCMTD1-206ENST00000521344 KDM3BQ7LBC6 1761 aa22.52■■□□□ 1.2
PCMTD1-206ENST00000521344 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
PCMTD1-206ENST00000521344 MIS18AQ9NYP9 233 aa22.52■■□□□ 1.2
PCMTD1-206ENST00000521344 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.2
PCMTD1-206ENST00000521344 TNS1Q9HBL0 1735 aaKnown RBP22.52■■□□□ 1.2
PCMTD1-206ENST00000521344 PAPPAQ13219 1627 aa22.51■■□□□ 1.19
PCMTD1-206ENST00000521344 ZBED9Q6R2W3 1325 aa22.51■■□□□ 1.19
PCMTD1-206ENST00000521344 CFAP44Q96MT7 982 aa22.51■■□□□ 1.19
PCMTD1-206ENST00000521344 IL16Q14005 1332 aa22.5■■□□□ 1.19
PCMTD1-206ENST00000521344 ZNF853P0CG23 659 aa22.5■■□□□ 1.19
PCMTD1-206ENST00000521344 SLC39A6Q13433 755 aa22.5■■□□□ 1.19
PCMTD1-206ENST00000521344 IFT57Q9NWB7 429 aa22.5■■□□□ 1.19
PCMTD1-206ENST00000521344 ASAP1Q9ULH1 1129 aa22.5■■□□□ 1.19
PCMTD1-206ENST00000521344 CHL1O00533 1208 aa22.49■■□□□ 1.19
PCMTD1-206ENST00000521344 SPINK5Q9NQ38 1064 aaPredicted RBP22.49■■□□□ 1.19
PCMTD1-206ENST00000521344 ATG3Q9NT62 314 aa22.49■■□□□ 1.19
PCMTD1-206ENST00000521344 GNAI1P63096 354 aa22.48■■□□□ 1.19
PCMTD1-206ENST00000521344 GOLGA2Q08379 1002 aa22.48■■□□□ 1.19
PCMTD1-206ENST00000521344 UBR2Q8IWV8 1755 aa22.48■■□□□ 1.19
PCMTD1-206ENST00000521344 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
PCMTD1-206ENST00000521344 TSPYL4Q9UJ04 414 aa22.48■■□□□ 1.19
PCMTD1-206ENST00000521344 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
PCMTD1-206ENST00000521344 KCNQ3O43525 872 aa22.46■■□□□ 1.19
PCMTD1-206ENST00000521344 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
PCMTD1-206ENST00000521344 MBIPQ9NS73 344 aa22.45■■□□□ 1.19
PCMTD1-206ENST00000521344 LY75O60449 1722 aa22.45■■□□□ 1.18
PCMTD1-206ENST00000521344 APBA3O96018 575 aa22.45■■□□□ 1.18
PCMTD1-206ENST00000521344 TTC5Q8N0Z6 440 aa22.45■■□□□ 1.18
PCMTD1-206ENST00000521344 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
PCMTD1-206ENST00000521344 SLFN5Q08AF3 891 aa22.43■■□□□ 1.18
PCMTD1-206ENST00000521344 TSR2Q969E8 191 aaKnown RBP22.43■■□□□ 1.18
PCMTD1-206ENST00000521344 PALLDQ8WX93 1383 aa22.43■■□□□ 1.18
PCMTD1-206ENST00000521344 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
PCMTD1-206ENST00000521344 E9PSI1 815 aa22.43■■□□□ 1.18
PCMTD1-206ENST00000521344 PTCD1O75127 700 aaKnown RBP22.42■■□□□ 1.18
PCMTD1-206ENST00000521344 CCDC125Q86Z20 511 aa22.42■■□□□ 1.18
PCMTD1-206ENST00000521344 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
PCMTD1-206ENST00000521344 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
PCMTD1-206ENST00000521344 ZNF496Q96IT1 587 aaPredicted RBP22.41■■□□□ 1.18
PCMTD1-206ENST00000521344 MYH16Q9H6N6 1097 aa22.41■■□□□ 1.18
PCMTD1-206ENST00000521344 PLSCR1O15162 318 aa22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 EIF4A1P60842 406 aaKnown RBP22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 RBM42Q9BTD8 480 aaKnown RBP22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 RGPD3A6NKT7 1758 aaPredicted RBP22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 RGPD4Q7Z3J3 1758 aa22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 TRMT2AQ8IZ69 625 aaKnown RBP22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 UPF1Q92900 1129 aaKnown RBP eCLIP22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 FMNL2Q96PY5 1086 aa22.4■■□□□ 1.18
PCMTD1-206ENST00000521344 ZNF831Q5JPB2 1677 aa22.38■■□□□ 1.17
PCMTD1-206ENST00000521344 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
PCMTD1-206ENST00000521344 LOC102724428A0A0B4J2F2 783 aa22.37■■□□□ 1.17
PCMTD1-206ENST00000521344 SIK1P57059 783 aa22.37■■□□□ 1.17
PCMTD1-206ENST00000521344 HEG1Q9ULI3 1381 aa22.37■■□□□ 1.17
PCMTD1-206ENST00000521344 KRT24Q2M2I5 525 aa22.37■■□□□ 1.17
PCMTD1-206ENST00000521344 C5P01031 1676 aa22.36■■□□□ 1.17
PCMTD1-206ENST00000521344 TAF1LQ8IZX4 1826 aa22.36■■□□□ 1.17
PCMTD1-206ENST00000521344 DUSP27Q5VZP5 1158 aa22.36■■□□□ 1.17
PCMTD1-206ENST00000521344 TJP1Q07157 1748 aa22.36■■□□□ 1.17
PCMTD1-206ENST00000521344 ATP6V1AP38606 617 aa22.35■■□□□ 1.17
PCMTD1-206ENST00000521344 BAG6P46379 1132 aa22.35■■□□□ 1.17
PCMTD1-206ENST00000521344 EN1Q05925 392 aaPredicted RBP22.35■■□□□ 1.17
PCMTD1-206ENST00000521344 VSIG10Q8N0Z9 540 aa22.35■■□□□ 1.17
PCMTD1-206ENST00000521344 PROM2Q8N271 834 aa22.35■■□□□ 1.17
PCMTD1-206ENST00000521344 GIGYF1O75420 1035 aaPredicted RBP22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 C8orf58Q8NAV2 365 aa22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 CAMKK2Q96RR4 588 aa22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 CICQ96RK0 1608 aaPredicted RBP22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 KCNQ4P56696 695 aa22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 TXNRD1Q16881 649 aa22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
PCMTD1-206ENST00000521344 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.17
PCMTD1-206ENST00000521344 SNRPA1P09661 255 aaKnown RBP22.33■■□□□ 1.17
PCMTD1-206ENST00000521344 COL5A3P25940 1745 aaPredicted RBP22.32■■□□□ 1.16
PCMTD1-206ENST00000521344 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
PCMTD1-206ENST00000521344 EZH2Q15910 746 aaKnown RBP22.32■■□□□ 1.16
PCMTD1-206ENST00000521344 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
PCMTD1-206ENST00000521344 LRRC4BQ9NT99 713 aa22.32■■□□□ 1.16
PCMTD1-206ENST00000521344 LAMB4A4D0S4 1761 aa22.31■■□□□ 1.16
PCMTD1-206ENST00000521344 ITPK1Q13572 414 aa22.31■■□□□ 1.16
PCMTD1-206ENST00000521344 SLC27A3Q5K4L6 730 aa22.31■■□□□ 1.16
PCMTD1-206ENST00000521344 DNAJC10Q8IXB1 793 aa22.31■■□□□ 1.16
PCMTD1-206ENST00000521344 RREB1Q92766 1687 aa22.3■■□□□ 1.16
PCMTD1-206ENST00000521344 USP16Q9Y5T5 823 aa22.3■■□□□ 1.16
PCMTD1-206ENST00000521344 TWISTNBQ3B726 338 aaPredicted RBP22.29■■□□□ 1.16
PCMTD1-206ENST00000521344 TEX13AQ9BXU3 409 aaPredicted RBP22.29■■□□□ 1.16
PCMTD1-206ENST00000521344 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
PCMTD1-206ENST00000521344 HOXB7P09629 217 aa22.28■■□□□ 1.16
PCMTD1-206ENST00000521344 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
PCMTD1-206ENST00000521344 VAMP4O75379 141 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms