RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 CABP4P57796 275 aa8.34□□□□□ -1.07
IGHV4-55-201ENST00000520889 TEFQ10587 303 aa8.34□□□□□ -1.07
IGHV4-55-201ENST00000520889 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
IGHV4-55-201ENST00000520889 ZNF521Q96K83 1311 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 TMOD3Q9NYL9 352 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
IGHV4-55-201ENST00000520889 TAF1LQ8IZX4 1826 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 GNAI1P63096 354 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 VSIG10Q8N0Z9 540 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 PIGBQ92521 554 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
IGHV4-55-201ENST00000520889 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 ZBED9Q6R2W3 1325 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 RREB1Q92766 1687 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 CHL1O00533 1208 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 MCM10Q7L590 875 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 RRP7AQ9Y3A4 280 aaKnown RBP8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 HEG1Q9ULI3 1381 aa8.31□□□□□ -1.08
IGHV4-55-201ENST00000520889 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 KCPQ6ZWJ8 1503 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 COL5A3P25940 1745 aaPredicted RBP8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 KCNQ2O43526 872 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 TRIM37O94972 964 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 BAG6P46379 1132 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 ZNF790Q6PG37 636 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 ILDR2Q71H61 639 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 ACSBG1Q96GR2 724 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 ATG3Q9NT62 314 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 C5P01031 1676 aa8.3□□□□□ -1.08
IGHV4-55-201ENST00000520889 TJP1Q07157 1748 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 E9PSI1 815 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 HOXB7P09629 217 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 GOLGA2Q08379 1002 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 DCTN1Q14203 1278 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 UPF1Q92900 1129 aaKnown RBP eCLIP8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 SYTL4Q96C24 671 aaPredicted RBP8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 PALLDQ8WX93 1383 aa8.29□□□□□ -1.08
IGHV4-55-201ENST00000520889 APBA3O96018 575 aa8.28□□□□□ -1.08
IGHV4-55-201ENST00000520889 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
IGHV4-55-201ENST00000520889 TRMT2AQ8IZ69 625 aaKnown RBP8.28□□□□□ -1.08
IGHV4-55-201ENST00000520889 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
IGHV4-55-201ENST00000520889 MYH16Q9H6N6 1097 aa8.28□□□□□ -1.08
IGHV4-55-201ENST00000520889 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 CT47B1P0C2W7 299 aaPredicted RBP8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 EIF4A1P60842 406 aaKnown RBP8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 SLFN5Q08AF3 891 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 CAMKK2Q96RR4 588 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 THUMPD2Q9BTF0 503 aaKnown RBP8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 ERBB4Q15303 1308 aa8.27□□□□□ -1.09
IGHV4-55-201ENST00000520889 LOC102724428A0A0B4J2F2 783 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 SNRPA1P09661 255 aaKnown RBP8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 SIK1P57059 783 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 MBIPQ9NS73 344 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 C4BP0C0L5 1744 aa8.26□□□□□ -1.09
IGHV4-55-201ENST00000520889 MYH14Q7Z406 1995 aaKnown RBP8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 SLC39A6Q13433 755 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 PROM2Q8N271 834 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 ZNF496Q96IT1 587 aaPredicted RBP8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 CCNL1Q9UK58 526 aaPredicted RBP8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 UBR3Q6ZT12 1888 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 EP400Q96L91 3159 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 CNTNAP4Q9C0A0 1308 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 FANCIQ9NVI1 1328 aa8.25□□□□□ -1.09
IGHV4-55-201ENST00000520889 SOCS7O14512 581 aa8.24□□□□□ -1.09
IGHV4-55-201ENST00000520889 STARD3NLO95772 234 aa8.24□□□□□ -1.09
IGHV4-55-201ENST00000520889 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
IGHV4-55-201ENST00000520889 SLC4A9Q96Q91 983 aa8.24□□□□□ -1.09
IGHV4-55-201ENST00000520889 RGL2O15211 777 aa8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 KCNQ3O43525 872 aa8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 EN1Q05925 392 aaPredicted RBP8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 MIS18AQ9NYP9 233 aa8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 SALL2Q9Y467 1007 aaPredicted RBP8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 LAS1LQ9Y4W2 734 aaKnown RBP8.23□□□□□ -1.09
IGHV4-55-201ENST00000520889 TUBGCP6Q96RT7 1819 aa8.22□□□□□ -1.09
IGHV4-55-201ENST00000520889 PTCD1O75127 700 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms