RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
VPS37A-206ENST00000520140 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
VPS37A-206ENST00000520140 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
VPS37A-206ENST00000520140 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
VPS37A-206ENST00000520140 NHSQ6T4R5 1651 aa18.58■□□□□ 0.57
VPS37A-206ENST00000520140 BTBD11A6QL63 1104 aa18.58■□□□□ 0.57
VPS37A-206ENST00000520140 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.57
VPS37A-206ENST00000520140 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 BTAF1O14981 1849 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
VPS37A-206ENST00000520140 BCL9O00512 1426 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 MRC1P22897 1456 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 KCNQ3O43525 872 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
VPS37A-206ENST00000520140 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
VPS37A-206ENST00000520140 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
VPS37A-206ENST00000520140 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
VPS37A-206ENST00000520140 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 WDR63Q8IWG1 891 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 PTCD1O75127 700 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
VPS37A-206ENST00000520140 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
VPS37A-206ENST00000520140 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
VPS37A-206ENST00000520140 GNAI1P63096 354 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
VPS37A-206ENST00000520140 CHL1O00533 1208 aa18.52■□□□□ 0.56
VPS37A-206ENST00000520140 APBA3O96018 575 aa18.52■□□□□ 0.56
VPS37A-206ENST00000520140 ZNF853P0CG23 659 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KCNQ4P56696 695 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KRT24Q2M2I5 525 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.55
VPS37A-206ENST00000520140 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
VPS37A-206ENST00000520140 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
VPS37A-206ENST00000520140 PALLDQ8WX93 1383 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 IL16Q14005 1332 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
VPS37A-206ENST00000520140 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
VPS37A-206ENST00000520140 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
VPS37A-206ENST00000520140 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
VPS37A-206ENST00000520140 E9PSI1 815 aa18.49■□□□□ 0.55
VPS37A-206ENST00000520140 PRAMEF22A3QJZ6 481 aa18.48■□□□□ 0.55
VPS37A-206ENST00000520140 MYH16Q9H6N6 1097 aa18.48■□□□□ 0.55
VPS37A-206ENST00000520140 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
VPS37A-206ENST00000520140 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
VPS37A-206ENST00000520140 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
VPS37A-206ENST00000520140 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
VPS37A-206ENST00000520140 EN1Q05925 392 aaPredicted RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
VPS37A-206ENST00000520140 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
VPS37A-206ENST00000520140 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 SIK1P57059 783 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
VPS37A-206ENST00000520140 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
VPS37A-206ENST00000520140 LY75O60449 1722 aa18.44■□□□□ 0.54
VPS37A-206ENST00000520140 C5P01031 1676 aa18.43■□□□□ 0.54
VPS37A-206ENST00000520140 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
VPS37A-206ENST00000520140 EZH2Q15910 746 aaKnown RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 TRMT2AQ8IZ69 625 aaKnown RBP18.43■□□□□ 0.54
VPS37A-206ENST00000520140 PROM2Q8N271 834 aa18.42■□□□□ 0.54
VPS37A-206ENST00000520140 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
VPS37A-206ENST00000520140 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
VPS37A-206ENST00000520140 ITPK1Q13572 414 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 PLSCR1O15162 318 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 BAG6P46379 1132 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
VPS37A-206ENST00000520140 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
VPS37A-206ENST00000520140 TJP1Q07157 1748 aa18.4■□□□□ 0.54
VPS37A-206ENST00000520140 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
VPS37A-206ENST00000520140 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
VPS37A-206ENST00000520140 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
VPS37A-206ENST00000520140 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
VPS37A-206ENST00000520140 VAMP4O75379 141 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 A1BGP04217 495 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 ANXA1P04083 346 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms