RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 SMARCC1Q92922 1105 aaPredicted RBP27.81■■■□□ 2.04
PCM1-210ENST00000518936 ACSBG1Q96GR2 724 aa27.8■■■□□ 2.04
PCM1-210ENST00000518936 ZBED9Q6R2W3 1325 aa27.79■■■□□ 2.04
PCM1-210ENST00000518936 NFATC2IPQ8NCF5 419 aa27.79■■■□□ 2.04
PCM1-210ENST00000518936 IFT57Q9NWB7 429 aa27.79■■■□□ 2.04
PCM1-210ENST00000518936 SIPA1L3O60292 1781 aaPredicted RBP27.78■■■□□ 2.04
PCM1-210ENST00000518936 BTBD11A6QL63 1104 aa27.78■■■□□ 2.04
PCM1-210ENST00000518936 FAM182BQ5T319 152 aa27.78■■■□□ 2.04
PCM1-210ENST00000518936 TTC5Q8N0Z6 440 aa27.78■■■□□ 2.04
PCM1-210ENST00000518936 SALL2Q9Y467 1007 aaPredicted RBP27.78■■■□□ 2.04
PCM1-210ENST00000518936 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
PCM1-210ENST00000518936 CFAP44Q96MT7 982 aa27.77■■■□□ 2.04
PCM1-210ENST00000518936 MYH16Q9H6N6 1097 aa27.77■■■□□ 2.04
PCM1-210ENST00000518936 GOLGA2Q08379 1002 aa27.76■■■□□ 2.03
PCM1-210ENST00000518936 PIGBQ92521 554 aa27.74■■■□□ 2.03
PCM1-210ENST00000518936 CHMP4AQ9BY43 222 aa27.74■■■□□ 2.03
PCM1-210ENST00000518936 ZNF521Q96K83 1311 aa27.73■■■□□ 2.03
PCM1-210ENST00000518936 E9PSI1 815 aa27.73■■■□□ 2.03
PCM1-210ENST00000518936 TRIM37O94972 964 aa27.73■■■□□ 2.03
PCM1-210ENST00000518936 TSPYL4Q9UJ04 414 aa27.73■■■□□ 2.03
PCM1-210ENST00000518936 BTAF1O14981 1849 aa27.73■■■□□ 2.03
PCM1-210ENST00000518936 THUMPD2Q9BTF0 503 aaKnown RBP27.71■■■□□ 2.03
PCM1-210ENST00000518936 LAS1LQ9Y4W2 734 aaKnown RBP27.71■■■□□ 2.03
PCM1-210ENST00000518936 KCNQ2O43526 872 aa27.7■■■□□ 2.02
PCM1-210ENST00000518936 ZNF790Q6PG37 636 aa27.7■■■□□ 2.02
PCM1-210ENST00000518936 RGPD3A6NKT7 1758 aaPredicted RBP27.7■■■□□ 2.02
PCM1-210ENST00000518936 RGPD4Q7Z3J3 1758 aa27.7■■■□□ 2.02
PCM1-210ENST00000518936 CHL1O00533 1208 aa27.69■■■□□ 2.02
PCM1-210ENST00000518936 PAPPAQ13219 1627 aa27.69■■■□□ 2.02
PCM1-210ENST00000518936 PLSCR1O15162 318 aa27.68■■■□□ 2.02
PCM1-210ENST00000518936 BAG6P46379 1132 aa27.68■■■□□ 2.02
PCM1-210ENST00000518936 ZNF853P0CG23 659 aa27.67■■■□□ 2.02
PCM1-210ENST00000518936 FMNL2Q96PY5 1086 aa27.67■■■□□ 2.02
PCM1-210ENST00000518936 KDM3BQ7LBC6 1761 aa27.67■■■□□ 2.02
PCM1-210ENST00000518936 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
PCM1-210ENST00000518936 SOS1Q07889 1333 aaPredicted RBP27.67■■■□□ 2.02
PCM1-210ENST00000518936 PALLDQ8WX93 1383 aa27.66■■■□□ 2.02
PCM1-210ENST00000518936 APBA3O96018 575 aa27.66■■■□□ 2.02
PCM1-210ENST00000518936 VSIG10Q8N0Z9 540 aa27.66■■■□□ 2.02
PCM1-210ENST00000518936 TEX13AQ9BXU3 409 aaPredicted RBP27.65■■■□□ 2.02
PCM1-210ENST00000518936 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
PCM1-210ENST00000518936 EP400Q96L91 3159 aa27.64■■■□□ 2.02
PCM1-210ENST00000518936 SLC27A3Q5K4L6 730 aa27.64■■■□□ 2.02
PCM1-210ENST00000518936 ZNF831Q5JPB2 1677 aa27.64■■■□□ 2.02
PCM1-210ENST00000518936 UBR2Q8IWV8 1755 aa27.63■■■□□ 2.01
PCM1-210ENST00000518936 SENP3-EIF4A1A0A087X0R7 540 aa27.63■■■□□ 2.01
PCM1-210ENST00000518936 ASAP1Q9ULH1 1129 aa27.63■■■□□ 2.01
PCM1-210ENST00000518936 HOXB7P09629 217 aa27.61■■■□□ 2.01
PCM1-210ENST00000518936 YTHDC1Q96MU7 727 aaKnown RBP27.61■■■□□ 2.01
PCM1-210ENST00000518936 MBIPQ9NS73 344 aa27.61■■■□□ 2.01
PCM1-210ENST00000518936 SLFN5Q08AF3 891 aa27.6■■■□□ 2.01
PCM1-210ENST00000518936 RBM42Q9BTD8 480 aaKnown RBP27.6■■■□□ 2.01
PCM1-210ENST00000518936 LY75O60449 1722 aa27.6■■■□□ 2.01
PCM1-210ENST00000518936 SLC39A6Q13433 755 aa27.59■■■□□ 2.01
PCM1-210ENST00000518936 LOC102724428A0A0B4J2F2 783 aa27.58■■■□□ 2.01
PCM1-210ENST00000518936 SNRPA1P09661 255 aaKnown RBP27.58■■■□□ 2.01
PCM1-210ENST00000518936 SIK1P57059 783 aa27.58■■■□□ 2.01
PCM1-210ENST00000518936 FANCIQ9NVI1 1328 aa27.58■■■□□ 2.01
PCM1-210ENST00000518936 HEG1Q9ULI3 1381 aa27.58■■■□□ 2.01
PCM1-210ENST00000518936 CICQ96RK0 1608 aaPredicted RBP27.57■■■□□ 2
PCM1-210ENST00000518936 PTCD1O75127 700 aaKnown RBP27.57■■■□□ 2
PCM1-210ENST00000518936 EIF4A1P60842 406 aaKnown RBP27.57■■■□□ 2
PCM1-210ENST00000518936 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
PCM1-210ENST00000518936 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
PCM1-210ENST00000518936 CT47B1P0C2W7 299 aaPredicted RBP27.56■■■□□ 2
PCM1-210ENST00000518936 CCNL1Q9UK58 526 aaPredicted RBP27.56■■■□□ 2
PCM1-210ENST00000518936 STARD3NLO95772 234 aa27.55■■■□□ 2
PCM1-210ENST00000518936 ZNF496Q96IT1 587 aaPredicted RBP27.55■■■□□ 2
PCM1-210ENST00000518936 ATP6V1AP38606 617 aa27.54■■■□□ 2
PCM1-210ENST00000518936 UPF1Q92900 1129 aaKnown RBP eCLIP27.54■■■□□ 2
PCM1-210ENST00000518936 ZNF428Q96B54 188 aa27.54■■■□□ 2
PCM1-210ENST00000518936 PTF1AQ7RTS3 328 aa27.52■■■□□ 2
PCM1-210ENST00000518936 TRMT2AQ8IZ69 625 aaKnown RBP27.52■■■□□ 2
PCM1-210ENST00000518936 TSR2Q969E8 191 aaKnown RBP27.52■■■□□ 2
PCM1-210ENST00000518936 LAMB4A4D0S4 1761 aa27.5■■□□□ 1.99
PCM1-210ENST00000518936 GIGYF1O75420 1035 aaPredicted RBP27.5■■□□□ 1.99
PCM1-210ENST00000518936 TXNRD1Q16881 649 aa27.5■■□□□ 1.99
PCM1-210ENST00000518936 DUSP27Q5VZP5 1158 aa27.49■■□□□ 1.99
PCM1-210ENST00000518936 ERBB4Q15303 1308 aa27.48■■□□□ 1.99
PCM1-210ENST00000518936 KCNQ3O43525 872 aa27.48■■□□□ 1.99
PCM1-210ENST00000518936 TWISTNBQ3B726 338 aaPredicted RBP27.48■■□□□ 1.99
PCM1-210ENST00000518936 CDCA7LQ96GN5 454 aa27.48■■□□□ 1.99
PCM1-210ENST00000518936 CAMKK2Q96RR4 588 aa27.48■■□□□ 1.99
PCM1-210ENST00000518936 SPINK5Q9NQ38 1064 aaPredicted RBP27.48■■□□□ 1.99
PCM1-210ENST00000518936 C5P01031 1676 aa27.47■■□□□ 1.99
PCM1-210ENST00000518936 NPM2Q86SE8 214 aaKnown RBP27.47■■□□□ 1.99
PCM1-210ENST00000518936 EN1Q05925 392 aaPredicted RBP27.46■■□□□ 1.99
PCM1-210ENST00000518936 CCDC30Q5VVM6 783 aa27.46■■□□□ 1.99
PCM1-210ENST00000518936 EXOSC9Q06265 439 aaKnown RBP27.45■■□□□ 1.98
PCM1-210ENST00000518936 RC3H1Q5TC82 1133 aaKnown RBP27.45■■□□□ 1.98
PCM1-210ENST00000518936 TAF1LQ8IZX4 1826 aa27.44■■□□□ 1.98
PCM1-210ENST00000518936 RREB1Q92766 1687 aa27.44■■□□□ 1.98
PCM1-210ENST00000518936 HDGFL1Q5TGJ6 251 aa27.44■■□□□ 1.98
PCM1-210ENST00000518936 COL5A3P25940 1745 aaPredicted RBP27.44■■□□□ 1.98
PCM1-210ENST00000518936 TJP1Q07157 1748 aa27.44■■□□□ 1.98
PCM1-210ENST00000518936 CNTNAP4Q9C0A0 1308 aa27.43■■□□□ 1.98
PCM1-210ENST00000518936 NBPF14Q5TI25 921 aa27.43■■□□□ 1.98
PCM1-210ENST00000518936 STK31Q9BXU1 1019 aa27.43■■□□□ 1.98
PCM1-210ENST00000518936 CACNA1FO60840 1977 aa27.42■■□□□ 1.98
PCM1-210ENST00000518936 EZH2Q15910 746 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms