RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
ABCC3-216ENST00000515585 PLIN1O60240 522 aa17.81■□□□□ 0.44
ABCC3-216ENST00000515585 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
ABCC3-216ENST00000515585 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.81■□□□□ 0.44
ABCC3-216ENST00000515585 SSH1Q8WYL5 1049 aa17.81■□□□□ 0.44
ABCC3-216ENST00000515585 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
ABCC3-216ENST00000515585 HEG1Q9ULI3 1381 aa17.8■□□□□ 0.44
ABCC3-216ENST00000515585 IL2RBP14784 551 aa17.8■□□□□ 0.44
ABCC3-216ENST00000515585 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
ABCC3-216ENST00000515585 IFNL2Q8IZJ0 200 aa17.8■□□□□ 0.44
ABCC3-216ENST00000515585 STRN4Q9NRL3 753 aa17.8■□□□□ 0.44
ABCC3-216ENST00000515585 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-216ENST00000515585 EVA1CP58658 441 aa17.79■□□□□ 0.44
ABCC3-216ENST00000515585 PDE3AQ14432 1141 aa17.79■□□□□ 0.44
ABCC3-216ENST00000515585 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-216ENST00000515585 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
ABCC3-216ENST00000515585 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
ABCC3-216ENST00000515585 ITGB4P16144 1822 aa17.79■□□□□ 0.44
ABCC3-216ENST00000515585 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-216ENST00000515585 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
ABCC3-216ENST00000515585 SPATA31A1Q5TZJ5 1347 aa17.77■□□□□ 0.44
ABCC3-216ENST00000515585 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
ABCC3-216ENST00000515585 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
ABCC3-216ENST00000515585 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.44
ABCC3-216ENST00000515585 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
ABCC3-216ENST00000515585 C5P01031 1676 aa17.77■□□□□ 0.43
ABCC3-216ENST00000515585 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
ABCC3-216ENST00000515585 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
ABCC3-216ENST00000515585 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
ABCC3-216ENST00000515585 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
ABCC3-216ENST00000515585 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
ABCC3-216ENST00000515585 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
ABCC3-216ENST00000515585 SPATA31A5Q5VU36 1347 aa17.75■□□□□ 0.43
ABCC3-216ENST00000515585 SPATA31A7Q8IWB4 1347 aa17.75■□□□□ 0.43
ABCC3-216ENST00000515585 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
ABCC3-216ENST00000515585 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
ABCC3-216ENST00000515585 THRAP3Q9Y2W1 955 aaKnown RBP17.75■□□□□ 0.43
ABCC3-216ENST00000515585 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
ABCC3-216ENST00000515585 THSD7AQ9UPZ6 1657 aa17.74■□□□□ 0.43
ABCC3-216ENST00000515585 LRP5O75197 1615 aa17.74■□□□□ 0.43
ABCC3-216ENST00000515585 EIF4A1P60842 406 aaKnown RBP17.74■□□□□ 0.43
ABCC3-216ENST00000515585 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
ABCC3-216ENST00000515585 SLC52A2Q9HAB3 445 aa17.74■□□□□ 0.43
ABCC3-216ENST00000515585 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
ABCC3-216ENST00000515585 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 HOXB7P09629 217 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 TEFQ10587 303 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 ARHGAP45Q92619 1136 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
ABCC3-216ENST00000515585 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
ABCC3-216ENST00000515585 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
ABCC3-216ENST00000515585 CDCA7Q9BWT1 371 aaPredicted RBP17.72■□□□□ 0.43
ABCC3-216ENST00000515585 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
ABCC3-216ENST00000515585 RLBP1P12271 317 aa17.71■□□□□ 0.43
ABCC3-216ENST00000515585 TNNQ9UQP3 1299 aa17.71■□□□□ 0.43
ABCC3-216ENST00000515585 DOT1LQ8TEK3 1739 aa17.71■□□□□ 0.43
ABCC3-216ENST00000515585 KCNQ3O43525 872 aa17.7■□□□□ 0.42
ABCC3-216ENST00000515585 TRIM27P14373 513 aa17.7■□□□□ 0.42
ABCC3-216ENST00000515585 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
ABCC3-216ENST00000515585 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
ABCC3-216ENST00000515585 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
ABCC3-216ENST00000515585 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
ABCC3-216ENST00000515585 YY1P25490 414 aa17.69■□□□□ 0.42
ABCC3-216ENST00000515585 VPS72Q15906 364 aa17.69■□□□□ 0.42
ABCC3-216ENST00000515585 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
ABCC3-216ENST00000515585 MS4A1P11836 297 aa17.68■□□□□ 0.42
ABCC3-216ENST00000515585 BAG6P46379 1132 aa17.68■□□□□ 0.42
ABCC3-216ENST00000515585 ABCC4O15439 1325 aa17.68■□□□□ 0.42
ABCC3-216ENST00000515585 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
ABCC3-216ENST00000515585 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
ABCC3-216ENST00000515585 PANK1Q8TE04 598 aa17.67■□□□□ 0.42
ABCC3-216ENST00000515585 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
ABCC3-216ENST00000515585 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
ABCC3-216ENST00000515585 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
ABCC3-216ENST00000515585 ZNF790Q6PG37 636 aa17.66■□□□□ 0.42
ABCC3-216ENST00000515585 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
ABCC3-216ENST00000515585 NFATC2IPQ8NCF5 419 aa17.66■□□□□ 0.42
ABCC3-216ENST00000515585 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
ABCC3-216ENST00000515585 GIGYF1O75420 1035 aaPredicted RBP17.65■□□□□ 0.42
ABCC3-216ENST00000515585 AAMPQ13685 434 aa17.65■□□□□ 0.42
ABCC3-216ENST00000515585 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
ABCC3-216ENST00000515585 PTPRCP08575 1304 aa17.64■□□□□ 0.41
ABCC3-216ENST00000515585 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
ABCC3-216ENST00000515585 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
ABCC3-216ENST00000515585 MVPQ14764 893 aaKnown RBP17.63■□□□□ 0.41
ABCC3-216ENST00000515585 CCDC30Q5VVM6 783 aa17.63■□□□□ 0.41
ABCC3-216ENST00000515585 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
ABCC3-216ENST00000515585 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
ABCC3-216ENST00000515585 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
ABCC3-216ENST00000515585 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
ABCC3-216ENST00000515585 BCL9O00512 1426 aa17.62■□□□□ 0.41
ABCC3-216ENST00000515585 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
ABCC3-216ENST00000515585 EXOC5O00471 708 aa17.61■□□□□ 0.41
ABCC3-216ENST00000515585 CABP4P57796 275 aa17.61■□□□□ 0.41
ABCC3-216ENST00000515585 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
ABCC3-216ENST00000515585 B4GALNT3Q6L9W6 998 aa17.61■□□□□ 0.41
ABCC3-216ENST00000515585 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
ABCC3-216ENST00000515585 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
ABCC3-216ENST00000515585 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms