RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
DHFR-206ENST00000513048 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
DHFR-206ENST00000513048 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
DHFR-206ENST00000513048 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
DHFR-206ENST00000513048 VAMP4O75379 141 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 VPS72Q15906 364 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
DHFR-206ENST00000513048 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
DHFR-206ENST00000513048 BCAR3O75815 825 aa12.1□□□□□ -0.47
DHFR-206ENST00000513048 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
DHFR-206ENST00000513048 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
DHFR-206ENST00000513048 TOGARAM1Q9Y4F4 1720 aa12.1□□□□□ -0.47
DHFR-206ENST00000513048 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
DHFR-206ENST00000513048 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
DHFR-206ENST00000513048 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
DHFR-206ENST00000513048 TSPYL4Q9UJ04 414 aa12.09□□□□□ -0.47
DHFR-206ENST00000513048 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
DHFR-206ENST00000513048 FKBP8Q14318 412 aa12.08□□□□□ -0.48
DHFR-206ENST00000513048 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
DHFR-206ENST00000513048 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
DHFR-206ENST00000513048 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
DHFR-206ENST00000513048 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
DHFR-206ENST00000513048 GLI3P10071 1580 aa12.08□□□□□ -0.48
DHFR-206ENST00000513048 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 KCNQ3O43525 872 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 PLIN1O60240 522 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 ATRNO75882 1429 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
DHFR-206ENST00000513048 TEFQ10587 303 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 USP21Q9UK80 565 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 AFF2P51816 1311 aa12.07□□□□□ -0.48
DHFR-206ENST00000513048 ELL2O00472 640 aaPredicted RBP12.06□□□□□ -0.48
DHFR-206ENST00000513048 NEFLP07196 543 aa12.06□□□□□ -0.48
DHFR-206ENST00000513048 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
DHFR-206ENST00000513048 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
DHFR-206ENST00000513048 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
DHFR-206ENST00000513048 PAPPAQ13219 1627 aa12.06□□□□□ -0.48
DHFR-206ENST00000513048 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
DHFR-206ENST00000513048 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
DHFR-206ENST00000513048 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
DHFR-206ENST00000513048 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
DHFR-206ENST00000513048 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
DHFR-206ENST00000513048 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
DHFR-206ENST00000513048 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
DHFR-206ENST00000513048 SOS1Q07889 1333 aaPredicted RBP12.05□□□□□ -0.48
DHFR-206ENST00000513048 ITGB4P16144 1822 aa12.04□□□□□ -0.48
DHFR-206ENST00000513048 EXOC5O00471 708 aa12.04□□□□□ -0.48
DHFR-206ENST00000513048 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
DHFR-206ENST00000513048 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
DHFR-206ENST00000513048 UBR2Q8IWV8 1755 aa12.04□□□□□ -0.48
DHFR-206ENST00000513048 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
DHFR-206ENST00000513048 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
DHFR-206ENST00000513048 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
DHFR-206ENST00000513048 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
DHFR-206ENST00000513048 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
DHFR-206ENST00000513048 HOXB7P09629 217 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 CABP4P57796 275 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 DDB1Q16531 1140 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
DHFR-206ENST00000513048 ZNF790Q6PG37 636 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
DHFR-206ENST00000513048 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
DHFR-206ENST00000513048 TNNQ9UQP3 1299 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 C5P01031 1676 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
DHFR-206ENST00000513048 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
DHFR-206ENST00000513048 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
DHFR-206ENST00000513048 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
DHFR-206ENST00000513048 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
DHFR-206ENST00000513048 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
DHFR-206ENST00000513048 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
DHFR-206ENST00000513048 RLBP1P12271 317 aa12□□□□□ -0.49
DHFR-206ENST00000513048 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
DHFR-206ENST00000513048 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
DHFR-206ENST00000513048 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
DHFR-206ENST00000513048 CRBNQ96SW2 442 aa12□□□□□ -0.49
DHFR-206ENST00000513048 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
DHFR-206ENST00000513048 BCL9O00512 1426 aa12□□□□□ -0.49
DHFR-206ENST00000513048 TRIM27P14373 513 aa11.99□□□□□ -0.49
DHFR-206ENST00000513048 PIGBQ92521 554 aa11.99□□□□□ -0.49
DHFR-206ENST00000513048 ARHGAP45Q92619 1136 aa11.99□□□□□ -0.49
DHFR-206ENST00000513048 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
DHFR-206ENST00000513048 ZNF496Q96IT1 587 aaPredicted RBP11.99□□□□□ -0.49
DHFR-206ENST00000513048 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
DHFR-206ENST00000513048 RGS12O14924 1447 aa11.99□□□□□ -0.49
DHFR-206ENST00000513048 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
DHFR-206ENST00000513048 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
DHFR-206ENST00000513048 PANK1Q8TE04 598 aa11.98□□□□□ -0.49
DHFR-206ENST00000513048 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
DHFR-206ENST00000513048 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
DHFR-206ENST00000513048 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms