RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 RDH13Q8NBN7 331 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 USP21Q9UK80 565 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
CALCOCO2-213ENST00000509112 LRP5O75197 1615 aa6.65□□□□□ -1.35
CALCOCO2-213ENST00000509112 TBC1D2Q9BYX2 928 aa6.64□□□□□ -1.35
CALCOCO2-213ENST00000509112 RPGRIP1LQ68CZ1 1315 aa6.64□□□□□ -1.35
CALCOCO2-213ENST00000509112 BCL9LQ86UU0 1499 aa6.64□□□□□ -1.35
CALCOCO2-213ENST00000509112 PPLO60437 1756 aa6.64□□□□□ -1.35
CALCOCO2-213ENST00000509112 SPTLC1O15269 473 aa6.63□□□□□ -1.35
CALCOCO2-213ENST00000509112 NPHP3Q7Z494 1330 aa6.63□□□□□ -1.35
CALCOCO2-213ENST00000509112 PXDNQ92626 1479 aa6.63□□□□□ -1.35
CALCOCO2-213ENST00000509112 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.63□□□□□ -1.35
CALCOCO2-213ENST00000509112 TSR3Q9UJK0 312 aaKnown RBP6.63□□□□□ -1.35
CALCOCO2-213ENST00000509112 KNDC1Q76NI1 1749 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 NWD2Q9ULI1 1742 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 KIF1AQ12756 1690 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 SLIT2O94813 1529 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 TECPR2O15040 1411 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 BLMP54132 1417 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 ROBO2Q9HCK4 1378 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 CLK2P49760 499 aaKnown RBP6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 PRPF38BQ5VTL8 546 aaKnown RBP6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 WNT2BQ93097 391 aa6.62□□□□□ -1.35
CALCOCO2-213ENST00000509112 EP400Q96L91 3159 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 GLI3P10071 1580 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 HOXA2O43364 376 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 ACTN4O43707 911 aaKnown RBP6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 ADAMTS2O95450 1211 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 RSBN1LQ6PCB5 846 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 DDX17Q92841 729 aaKnown RBP6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 GJD4Q96KN9 370 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 BRWD3Q6RI45 1802 aa6.61□□□□□ -1.35
CALCOCO2-213ENST00000509112 CFHP08603 1231 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 ATP6V1AP38606 617 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 PPP4CP60510 307 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 RIC3Q7Z5B4 369 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 USP32Q8NFA0 1604 aa6.6□□□□□ -1.35
CALCOCO2-213ENST00000509112 FMN2Q9NZ56 1722 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 IFT172Q9UG01 1749 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 SRCAPQ6ZRS2 3230 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 SPDYE5A6NIY4 337 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 UNC5CLQ8IV45 518 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 SIRT1Q96EB6 747 aa6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 SALL2Q9Y467 1007 aaPredicted RBP6.59□□□□□ -1.35
CALCOCO2-213ENST00000509112 RALGAPBQ86X10 1494 aa6.59□□□□□ -1.36
CALCOCO2-213ENST00000509112 CCDC144AA2RUR9 1427 aa6.59□□□□□ -1.36
CALCOCO2-213ENST00000509112 MOXD2PA6NHM9 499 aa6.58□□□□□ -1.36
CALCOCO2-213ENST00000509112 FLIIQ13045 1269 aa6.58□□□□□ -1.36
CALCOCO2-213ENST00000509112 HPS5Q9UPZ3 1129 aa6.58□□□□□ -1.36
CALCOCO2-213ENST00000509112 NAIPQ13075 1403 aa6.58□□□□□ -1.36
CALCOCO2-213ENST00000509112 ABCC11Q96J66 1382 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 SPATA31A3Q5VYP0 1347 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 ABCA3Q99758 1704 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 FDX1P10109 184 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 FUT2Q10981 343 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 Q3C1V9 767 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 RRBP1Q9P2E9 1410 aaKnown RBP6.57□□□□□ -1.36
CALCOCO2-213ENST00000509112 RGPD1P0DJD0 1748 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 LILRB3O75022 631 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 RNF40O75150 1001 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 VPS72Q15906 364 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 TMEM259Q4ZIN3 620 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 LIMD1Q9UGP4 676 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 NRAPQ86VF7 1730 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 SBNO1A3KN83 1393 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 ANKRD30BQ9BXX2 1392 aa6.56□□□□□ -1.36
CALCOCO2-213ENST00000509112 FOXO3O43524 673 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 BCAMP50895 628 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 SF3B2Q13435 895 aaKnown RBP6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 MORN1Q5T089 497 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 POLR3EQ9NVU0 708 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 DISP2A7MBM2 1401 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 TNS3Q68CZ2 1445 aa6.55□□□□□ -1.36
CALCOCO2-213ENST00000509112 RGPD8O14715 1765 aaPredicted RBP6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 NRXN1Q9ULB1 1477 aa6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 SPATA31E1Q6ZUB1 1445 aa6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 NR1I2O75469 434 aa6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 ARHGEF10O15013 1369 aa6.54□□□□□ -1.36
CALCOCO2-213ENST00000509112 ACIN1Q9UKV3 1341 aaKnown RBP6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 ADGRB2O60241 1585 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 ANKARQ7Z5J8 1434 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 ALS2Q96Q42 1657 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 APLP1P51693 650 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 PSME1Q06323 249 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 MTMR2Q13614 643 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 DESI1Q6ICB0 168 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 KRT27Q7Z3Y8 459 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms