RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRIM41-204ENST00000508930 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
TRIM41-204ENST00000508930 PTPRCP08575 1304 aa17.22■□□□□ 0.35
TRIM41-204ENST00000508930 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 SOX12O15370 315 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 KDM4AO75164 1064 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 CHMLP26374 656 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 INO80Q9ULG1 1556 aaPredicted RBP17.21■□□□□ 0.35
TRIM41-204ENST00000508930 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
TRIM41-204ENST00000508930 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 UBE2HP62256 183 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 WAPLQ7Z5K2 1190 aa17.21■□□□□ 0.35
TRIM41-204ENST00000508930 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 ATP10DQ9P241 1426 aa17.2■□□□□ 0.34
TRIM41-204ENST00000508930 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
TRIM41-204ENST00000508930 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 GTPBP4Q9BZE4 634 aaKnown RBP17.2■□□□□ 0.34
TRIM41-204ENST00000508930 TPM3P06753 285 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
TRIM41-204ENST00000508930 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
TRIM41-204ENST00000508930 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
TRIM41-204ENST00000508930 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
TRIM41-204ENST00000508930 IGSF3O75054 1194 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 ZNF771Q7L3S4 317 aaPredicted RBP17.19■□□□□ 0.34
TRIM41-204ENST00000508930 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
TRIM41-204ENST00000508930 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 RIOK3O14730 519 aaKnown RBP17.18■□□□□ 0.34
TRIM41-204ENST00000508930 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 STX6O43752 255 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 CHD1O14646 1710 aa17.18■□□□□ 0.34
TRIM41-204ENST00000508930 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
TRIM41-204ENST00000508930 G2E3Q7L622 706 aa17.17■□□□□ 0.34
TRIM41-204ENST00000508930 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.343e-7■■■■□ 19.3
TRIM41-204ENST00000508930 PPLO60437 1756 aa17.17■□□□□ 0.34
TRIM41-204ENST00000508930 UHRF1BP1LA0JNW5 1464 aa17.16■□□□□ 0.34
TRIM41-204ENST00000508930 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
TRIM41-204ENST00000508930 GNAI3P08754 354 aa17.16■□□□□ 0.34
TRIM41-204ENST00000508930 CCDC192P0DO97 292 aa17.16■□□□□ 0.34
TRIM41-204ENST00000508930 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
TRIM41-204ENST00000508930 DTNBO60941 627 aa17.16■□□□□ 0.34
TRIM41-204ENST00000508930 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
TRIM41-204ENST00000508930 SYT1P21579 422 aa17.15■□□□□ 0.34
TRIM41-204ENST00000508930 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.343e-7■■■■□ 21.1
TRIM41-204ENST00000508930 CHL1O00533 1208 aa17.15■□□□□ 0.34
TRIM41-204ENST00000508930 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
TRIM41-204ENST00000508930 LMTK2Q8IWU2 1503 aa17.14■□□□□ 0.34
TRIM41-204ENST00000508930 SPTLC3Q9NUV7 552 aa17.14■□□□□ 0.33
TRIM41-204ENST00000508930 RGS12O14924 1447 aa17.14■□□□□ 0.33
TRIM41-204ENST00000508930 F13A1P00488 732 aa17.14■□□□□ 0.33
TRIM41-204ENST00000508930 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
TRIM41-204ENST00000508930 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
TRIM41-204ENST00000508930 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
TRIM41-204ENST00000508930 ABCC3O15438 1527 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
TRIM41-204ENST00000508930 KIF20AO95235 890 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 KCNJ4P48050 445 aa17.13■□□□□ 0.33
TRIM41-204ENST00000508930 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 ZNF592Q92610 1267 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 AK2P54819 239 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 C16orf45Q96MC5 204 aaPredicted RBP17.12■□□□□ 0.33
TRIM41-204ENST00000508930 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
TRIM41-204ENST00000508930 PTGS1P23219 599 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 OS9Q13438 667 aaPredicted RBP17.12■□□□□ 0.33
TRIM41-204ENST00000508930 CAMK4Q16566 473 aa17.12■□□□□ 0.33
TRIM41-204ENST00000508930 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
TRIM41-204ENST00000508930 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
TRIM41-204ENST00000508930 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
TRIM41-204ENST00000508930 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
TRIM41-204ENST00000508930 HSPA4P34932 840 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 CPA1P15085 419 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 GJB2P29033 226 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
TRIM41-204ENST00000508930 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 UBTFL1P0CB47 393 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-204ENST00000508930 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
TRIM41-204ENST00000508930 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
TRIM41-204ENST00000508930 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
TRIM41-204ENST00000508930 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
TRIM41-204ENST00000508930 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
TRIM41-204ENST00000508930 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
TRIM41-204ENST00000508930 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
TRIM41-204ENST00000508930 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
TRIM41-204ENST00000508930 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.33
TRIM41-204ENST00000508930 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms