RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 SYTL4Q96C24 671 aaPredicted RBP7.93□□□□□ -1.14
SSBP2-210ENST00000508912 ARFGEF1Q9Y6D6 1849 aa7.93□□□□□ -1.14
SSBP2-210ENST00000508912 ANKRD36BQ8N2N9 1353 aa7.93□□□□□ -1.14
SSBP2-210ENST00000508912 CUL9Q8IWT3 2517 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.92□□□□□ -1.14
SSBP2-210ENST00000508912 SSFA2P28290 1259 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
SSBP2-210ENST00000508912 CAPNS2Q96L46 248 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 C14orf93Q9H972 538 aaKnown RBP7.92□□□□□ -1.14
SSBP2-210ENST00000508912 ACEP12821 1306 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 NSD2O96028 1365 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 PIK3C2GO75747 1445 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 NSD3Q9BZ95 1437 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 SZT2Q5T011 3432 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 SBF1O95248 1867 aa7.92□□□□□ -1.14
SSBP2-210ENST00000508912 ARHGEF25Q86VW2 580 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 AMIGO3Q86WK7 504 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 AK7Q96M32 723 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 USP47Q96K76 1375 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 LTBP1Q14766 1721 aa7.91□□□□□ -1.14
SSBP2-210ENST00000508912 BRCA1P38398 1863 aaKnown RBP7.9□□□□□ -1.14
SSBP2-210ENST00000508912 PLEKHG3A1L390 1219 aa7.9□□□□□ -1.14
SSBP2-210ENST00000508912 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.14
SSBP2-210ENST00000508912 SPDYE6P0CI01 402 aa7.9□□□□□ -1.14
SSBP2-210ENST00000508912 CACNB1Q02641 598 aaPredicted RBP7.9□□□□□ -1.14
SSBP2-210ENST00000508912 SPDYE2Q495Y8 402 aa7.9□□□□□ -1.14
SSBP2-210ENST00000508912 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.14
SSBP2-210ENST00000508912 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
SSBP2-210ENST00000508912 ROCK1Q13464 1354 aa7.89□□□□□ -1.15
SSBP2-210ENST00000508912 PHF14O94880 888 aa7.89□□□□□ -1.15
SSBP2-210ENST00000508912 RASSF7Q02833 373 aa7.89□□□□□ -1.15
SSBP2-210ENST00000508912 SLIT3O75094 1523 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 CPSF1Q10570 1443 aaKnown RBP7.88□□□□□ -1.15
SSBP2-210ENST00000508912 IQCA1LA6NCM1 817 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
SSBP2-210ENST00000508912 NLRP6P59044 892 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 CYP4F22Q6NT55 531 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 DDX54Q8TDD1 881 aaKnown RBP7.88□□□□□ -1.15
SSBP2-210ENST00000508912 COLQQ9Y215 455 aaPredicted RBP7.88□□□□□ -1.15
SSBP2-210ENST00000508912 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 CASP8AP2Q9UKL3 1982 aa7.88□□□□□ -1.15
SSBP2-210ENST00000508912 C5P01031 1676 aa7.87□□□□□ -1.15
SSBP2-210ENST00000508912 COL25A1Q9BXS0 654 aaPredicted RBP7.87□□□□□ -1.15
SSBP2-210ENST00000508912 COL6A3P12111 3177 aa7.86□□□□□ -1.15
SSBP2-210ENST00000508912 PAXIP1Q6ZW49 1069 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-210ENST00000508912 PRDM6Q9NQX0 595 aa7.86□□□□□ -1.15
SSBP2-210ENST00000508912 CCDC61Q9Y6R9 512 aa7.86□□□□□ -1.15
SSBP2-210ENST00000508912 KAT6BQ8WYB5 2073 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 AOC2O75106 756 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 TMF1P82094 1093 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 GRM1Q13255 1194 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 FAM50AQ14320 339 aaKnown RBP7.85□□□□□ -1.15
SSBP2-210ENST00000508912 CFAP70Q5T0N1 1121 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 CNTROBQ8N137 903 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 KCNH5Q8NCM2 988 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 TAF1DQ9H5J8 278 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-210ENST00000508912 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
SSBP2-210ENST00000508912 TOGARAM1Q9Y4F4 1720 aa7.84□□□□□ -1.15
SSBP2-210ENST00000508912 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
SSBP2-210ENST00000508912 RGL3Q3MIN7 710 aa7.84□□□□□ -1.15
SSBP2-210ENST00000508912 L3MBTL3Q96JM7 780 aaPredicted RBP7.84□□□□□ -1.15
SSBP2-210ENST00000508912 DDX21Q9NR30 783 aaKnown RBP eCLIP7.84□□□□□ -1.15
SSBP2-210ENST00000508912 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
SSBP2-210ENST00000508912 C4BP0C0L5 1744 aa7.83□□□□□ -1.16
SSBP2-210ENST00000508912 CTU1Q7Z7A3 348 aaKnown RBP7.83□□□□□ -1.16
SSBP2-210ENST00000508912 CLEC11AQ9Y240 323 aa7.83□□□□□ -1.16
SSBP2-210ENST00000508912 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
SSBP2-210ENST00000508912 PKN2Q16513 984 aaKnown RBP7.82□□□□□ -1.16
SSBP2-210ENST00000508912 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
SSBP2-210ENST00000508912 UBR3Q6ZT12 1888 aa7.82□□□□□ -1.16
SSBP2-210ENST00000508912 PNMA8AQ86V59 439 aaPredicted RBP7.82□□□□□ -1.16
SSBP2-210ENST00000508912 TIAM2Q8IVF5 1701 aa7.82□□□□□ -1.16
SSBP2-210ENST00000508912 TRAK1Q9UPV9 953 aa7.82□□□□□ -1.16
SSBP2-210ENST00000508912 PALLDQ8WX93 1383 aa7.82□□□□□ -1.16
SSBP2-210ENST00000508912 TAF1LQ8IZX4 1826 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 NFKBIEO00221 500 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 COL9A1P20849 921 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 CHRNA5P30532 468 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 PLA2G5P39877 138 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
SSBP2-210ENST00000508912 MAP1SQ66K74 1059 aaPredicted RBP7.81□□□□□ -1.16
SSBP2-210ENST00000508912 CIAPIN1Q6FI81 312 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 PLCD3Q8N3E9 789 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 HHIPL1Q96JK4 782 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 CDK19Q9BWU1 502 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 SAGE1Q9NXZ1 904 aa7.81□□□□□ -1.16
SSBP2-210ENST00000508912 SMARCC1Q92922 1105 aaPredicted RBP7.8□□□□□ -1.16
SSBP2-210ENST00000508912 OTUD5Q96G74 571 aa7.8□□□□□ -1.16
SSBP2-210ENST00000508912 MKI67P46013 3256 aaKnown RBP7.8□□□□□ -1.16
SSBP2-210ENST00000508912 C4AP0C0L4 1744 aa7.8□□□□□ -1.16
SSBP2-210ENST00000508912 RGPD5Q99666 1765 aa7.79□□□□□ -1.16
SSBP2-210ENST00000508912 DOT1LQ8TEK3 1739 aa7.79□□□□□ -1.16
SSBP2-210ENST00000508912 GNPATO15228 680 aa7.79□□□□□ -1.16
SSBP2-210ENST00000508912 TRAPPC3LQ5T215 181 aa7.79□□□□□ -1.16
SSBP2-210ENST00000508912 CST9Q5W186 159 aa7.79□□□□□ -1.16
SSBP2-210ENST00000508912 GYS1P13807 737 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms