RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 IL16Q14005 1332 aa12.78□□□□□ -0.36
SRPK1-209ENST00000507909 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
SRPK1-209ENST00000507909 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
SRPK1-209ENST00000507909 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
SRPK1-209ENST00000507909 PIGBQ92521 554 aa12.77□□□□□ -0.37
SRPK1-209ENST00000507909 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
SRPK1-209ENST00000507909 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
SRPK1-209ENST00000507909 KCNQ2O43526 872 aa12.76□□□□□ -0.37
SRPK1-209ENST00000507909 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
SRPK1-209ENST00000507909 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SRPK1-209ENST00000507909 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
SRPK1-209ENST00000507909 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
SRPK1-209ENST00000507909 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
SRPK1-209ENST00000507909 TRIM37O94972 964 aa12.75□□□□□ -0.37
SRPK1-209ENST00000507909 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
SRPK1-209ENST00000507909 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
SRPK1-209ENST00000507909 GNAI1P63096 354 aa12.74□□□□□ -0.37
SRPK1-209ENST00000507909 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
SRPK1-209ENST00000507909 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
SRPK1-209ENST00000507909 TSPYL4Q9UJ04 414 aa12.74□□□□□ -0.37
SRPK1-209ENST00000507909 LAS1LQ9Y4W2 734 aaKnown RBP12.74□□□□□ -0.37
SRPK1-209ENST00000507909 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
SRPK1-209ENST00000507909 E9PSI1 815 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 CHL1O00533 1208 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 ZNF790Q6PG37 636 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 TTC5Q8N0Z6 440 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-209ENST00000507909 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
SRPK1-209ENST00000507909 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
SRPK1-209ENST00000507909 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
SRPK1-209ENST00000507909 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
SRPK1-209ENST00000507909 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
SRPK1-209ENST00000507909 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
SRPK1-209ENST00000507909 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
SRPK1-209ENST00000507909 LY75O60449 1722 aa12.71□□□□□ -0.37
SRPK1-209ENST00000507909 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
SRPK1-209ENST00000507909 CCDC125Q86Z20 511 aa12.71□□□□□ -0.37
SRPK1-209ENST00000507909 MBIPQ9NS73 344 aa12.71□□□□□ -0.37
SRPK1-209ENST00000507909 MIS18AQ9NYP9 233 aa12.71□□□□□ -0.37
SRPK1-209ENST00000507909 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.38
SRPK1-209ENST00000507909 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
SRPK1-209ENST00000507909 APBA3O96018 575 aa12.7□□□□□ -0.38
SRPK1-209ENST00000507909 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
SRPK1-209ENST00000507909 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
SRPK1-209ENST00000507909 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
SRPK1-209ENST00000507909 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
SRPK1-209ENST00000507909 KCNQ3O43525 872 aa12.69□□□□□ -0.38
SRPK1-209ENST00000507909 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
SRPK1-209ENST00000507909 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
SRPK1-209ENST00000507909 FMNL2Q96PY5 1086 aa12.69□□□□□ -0.38
SRPK1-209ENST00000507909 PLSCR1O15162 318 aa12.68□□□□□ -0.38
SRPK1-209ENST00000507909 PTCD1O75127 700 aaKnown RBP12.68□□□□□ -0.38
SRPK1-209ENST00000507909 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
SRPK1-209ENST00000507909 ZNF496Q96IT1 587 aaPredicted RBP12.68□□□□□ -0.38
SRPK1-209ENST00000507909 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
SRPK1-209ENST00000507909 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
SRPK1-209ENST00000507909 LOC102724428A0A0B4J2F2 783 aa12.67□□□□□ -0.38
SRPK1-209ENST00000507909 BAG6P46379 1132 aa12.67□□□□□ -0.38
SRPK1-209ENST00000507909 SIK1P57059 783 aa12.67□□□□□ -0.38
SRPK1-209ENST00000507909 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
SRPK1-209ENST00000507909 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
SRPK1-209ENST00000507909 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
SRPK1-209ENST00000507909 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
SRPK1-209ENST00000507909 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
SRPK1-209ENST00000507909 SLC27A3Q5K4L6 730 aa12.66□□□□□ -0.38
SRPK1-209ENST00000507909 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
SRPK1-209ENST00000507909 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
SRPK1-209ENST00000507909 C5P01031 1676 aa12.66□□□□□ -0.38
SRPK1-209ENST00000507909 TJP1Q07157 1748 aa12.65□□□□□ -0.38
SRPK1-209ENST00000507909 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-209ENST00000507909 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
SRPK1-209ENST00000507909 HOXB7P09629 217 aa12.65□□□□□ -0.38
SRPK1-209ENST00000507909 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
SRPK1-209ENST00000507909 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
SRPK1-209ENST00000507909 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-209ENST00000507909 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-209ENST00000507909 GIGYF1O75420 1035 aaPredicted RBP12.64□□□□□ -0.39
SRPK1-209ENST00000507909 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
SRPK1-209ENST00000507909 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
SRPK1-209ENST00000507909 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
SRPK1-209ENST00000507909 RREB1Q92766 1687 aa12.64□□□□□ -0.39
SRPK1-209ENST00000507909 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-209ENST00000507909 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
SRPK1-209ENST00000507909 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
SRPK1-209ENST00000507909 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
SRPK1-209ENST00000507909 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
SRPK1-209ENST00000507909 STARD3NLO95772 234 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 ITPK1Q13572 414 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
SRPK1-209ENST00000507909 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-209ENST00000507909 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 PROM2Q8N271 834 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
SRPK1-209ENST00000507909 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
SRPK1-209ENST00000507909 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
SRPK1-209ENST00000507909 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
SRPK1-209ENST00000507909 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms