RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
LMNA-221ENST00000506981 KCNQ4P56696 695 aa25.69■■□□□ 1.7
LMNA-221ENST00000506981 ASAP1Q9ULH1 1129 aa25.69■■□□□ 1.7
LMNA-221ENST00000506981 SIPA1L3O60292 1781 aaPredicted RBP25.69■■□□□ 1.7
LMNA-221ENST00000506981 PHACTR3Q96KR7 559 aa25.68■■□□□ 1.7
LMNA-221ENST00000506981 C4BP0C0L5 1744 aa25.68■■□□□ 1.7
LMNA-221ENST00000506981 NFATC2IPQ8NCF5 419 aa25.67■■□□□ 1.7
LMNA-221ENST00000506981 LGR6Q9HBX8 967 aa25.67■■□□□ 1.7
LMNA-221ENST00000506981 ATG3Q9NT62 314 aa25.67■■□□□ 1.7
LMNA-221ENST00000506981 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
LMNA-221ENST00000506981 SLC52A2Q9HAB3 445 aa25.66■■□□□ 1.7
LMNA-221ENST00000506981 LOC102724428A0A0B4J2F2 783 aa25.65■■□□□ 1.7
LMNA-221ENST00000506981 ANP32CO43423 234 aa25.65■■□□□ 1.7
LMNA-221ENST00000506981 SIK1P57059 783 aa25.65■■□□□ 1.7
LMNA-221ENST00000506981 WDR43Q15061 677 aaKnown RBP eCLIP25.65■■□□□ 1.7
LMNA-221ENST00000506981 ZNF827Q17R98 1081 aa25.64■■□□□ 1.7
LMNA-221ENST00000506981 COL5A3P25940 1745 aaPredicted RBP25.63■■□□□ 1.69
LMNA-221ENST00000506981 TEFQ10587 303 aa25.63■■□□□ 1.69
LMNA-221ENST00000506981 RTF1Q92541 710 aaKnown RBP25.63■■□□□ 1.69
LMNA-221ENST00000506981 AKT1S1Q96B36 256 aa25.63■■□□□ 1.69
LMNA-221ENST00000506981 RBM42Q9BTD8 480 aaKnown RBP25.63■■□□□ 1.69
LMNA-221ENST00000506981 UBR3Q6ZT12 1888 aa25.62■■□□□ 1.69
LMNA-221ENST00000506981 ATP6V1AP38606 617 aa25.62■■□□□ 1.69
LMNA-221ENST00000506981 TFCP2L1Q9NZI6 479 aa25.62■■□□□ 1.69
LMNA-221ENST00000506981 UBR2Q8IWV8 1755 aa25.61■■□□□ 1.69
LMNA-221ENST00000506981 CICQ96RK0 1608 aaPredicted RBP25.6■■□□□ 1.69
LMNA-221ENST00000506981 PLEKHF1Q96S99 279 aa25.59■■□□□ 1.69
LMNA-221ENST00000506981 TJP1Q07157 1748 aa25.59■■□□□ 1.69
LMNA-221ENST00000506981 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
LMNA-221ENST00000506981 AK7Q96M32 723 aa25.58■■□□□ 1.69
LMNA-221ENST00000506981 PTCD1O75127 700 aaKnown RBP25.57■■□□□ 1.68
LMNA-221ENST00000506981 CEMIPQ8WUJ3 1361 aa25.56■■□□□ 1.68
LMNA-221ENST00000506981 HTATSF1O43719 755 aaKnown RBP25.56■■□□□ 1.68
LMNA-221ENST00000506981 NFE2L2Q16236 605 aa25.55■■□□□ 1.68
LMNA-221ENST00000506981 TTC5Q8N0Z6 440 aa25.55■■□□□ 1.68
LMNA-221ENST00000506981 SPON1Q9HCB6 807 aa25.55■■□□□ 1.68
LMNA-221ENST00000506981 ITPK1Q13572 414 aa25.54■■□□□ 1.68
LMNA-221ENST00000506981 LINC00116Q8NCU8 138 aa25.54■■□□□ 1.68
LMNA-221ENST00000506981 PNPLA7Q6ZV29 1317 aa25.54■■□□□ 1.68
LMNA-221ENST00000506981 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
LMNA-221ENST00000506981 SLC39A6Q13433 755 aa25.53■■□□□ 1.68
LMNA-221ENST00000506981 MCM10Q7L590 875 aa25.53■■□□□ 1.68
LMNA-221ENST00000506981 PDGFDQ9GZP0 370 aaPredicted RBP25.53■■□□□ 1.68
LMNA-221ENST00000506981 MYH14Q7Z406 1995 aaKnown RBP25.53■■□□□ 1.68
LMNA-221ENST00000506981 MSH5O43196 834 aa25.52■■□□□ 1.68
LMNA-221ENST00000506981 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
LMNA-221ENST00000506981 FLAD1Q8NFF5 587 aa25.52■■□□□ 1.68
LMNA-221ENST00000506981 MTFR1LQ9H019 292 aa25.51■■□□□ 1.67
LMNA-221ENST00000506981 CCDC146Q8IYE0 955 aa25.5■■□□□ 1.67
LMNA-221ENST00000506981 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
LMNA-221ENST00000506981 RUNDC1Q96C34 613 aa25.5■■□□□ 1.67
LMNA-221ENST00000506981 SLC4A9Q96Q91 983 aa25.5■■□□□ 1.67
LMNA-221ENST00000506981 ADAMTS8Q9UP79 889 aa25.5■■□□□ 1.67
LMNA-221ENST00000506981 BTBD11A6QL63 1104 aa25.49■■□□□ 1.67
LMNA-221ENST00000506981 GNPATO15228 680 aa25.49■■□□□ 1.67
LMNA-221ENST00000506981 DCTN1Q14203 1278 aa25.49■■□□□ 1.67
LMNA-221ENST00000506981 COL24A1Q17RW2 1714 aa25.49■■□□□ 1.67
LMNA-221ENST00000506981 CNTNAP4Q9C0A0 1308 aa25.48■■□□□ 1.67
LMNA-221ENST00000506981 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
LMNA-221ENST00000506981 KDM3BQ7LBC6 1761 aa25.47■■□□□ 1.67
LMNA-221ENST00000506981 ZNF790Q6PG37 636 aa25.47■■□□□ 1.67
LMNA-221ENST00000506981 PPP1R1BQ9UD71 204 aaPredicted RBP25.47■■□□□ 1.67
LMNA-221ENST00000506981 ATF5Q9Y2D1 282 aaPredicted RBP25.47■■□□□ 1.67
LMNA-221ENST00000506981 PHF14O94880 888 aa25.46■■□□□ 1.67
LMNA-221ENST00000506981 SSFA2P28290 1259 aa25.46■■□□□ 1.67
LMNA-221ENST00000506981 RIPK4P57078 832 aa25.46■■□□□ 1.67
LMNA-221ENST00000506981 COL23A1Q86Y22 540 aaPredicted RBP25.46■■□□□ 1.67
LMNA-221ENST00000506981 MRS2Q9HD23 443 aa25.46■■□□□ 1.67
LMNA-221ENST00000506981 TMPOP42166 694 aaKnown RBP25.45■■□□□ 1.66
LMNA-221ENST00000506981 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
LMNA-221ENST00000506981 VSIG10Q8N0Z9 540 aa25.45■■□□□ 1.66
LMNA-221ENST00000506981 C4AP0C0L4 1744 aa25.45■■□□□ 1.66
LMNA-221ENST00000506981 RTCBQ9Y3I0 505 aaKnown RBP25.44■■□□□ 1.66
LMNA-221ENST00000506981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.43■■□□□ 1.66
LMNA-221ENST00000506981 DNAJC10Q8IXB1 793 aa25.43■■□□□ 1.66
LMNA-221ENST00000506981 FMNL2Q96PY5 1086 aa25.43■■□□□ 1.66
LMNA-221ENST00000506981 CRKLP46109 303 aaKnown RBP25.42■■□□□ 1.66
LMNA-221ENST00000506981 TAF7Q15545 349 aaPredicted RBP25.42■■□□□ 1.66
LMNA-221ENST00000506981 NEUROD2Q15784 382 aa25.42■■□□□ 1.66
LMNA-221ENST00000506981 CCDC184Q52MB2 194 aa25.42■■□□□ 1.66
LMNA-221ENST00000506981 PNISRQ8TF01 805 aaKnown RBP25.42■■□□□ 1.66
LMNA-221ENST00000506981 HEG1Q9ULI3 1381 aa25.42■■□□□ 1.66
LMNA-221ENST00000506981 ZNF496Q96IT1 587 aaPredicted RBP25.41■■□□□ 1.66
LMNA-221ENST00000506981 RRP7AQ9Y3A4 280 aaKnown RBP25.41■■□□□ 1.66
LMNA-221ENST00000506981 LAMB4A4D0S4 1761 aa25.41■■□□□ 1.66
LMNA-221ENST00000506981 POLD1P28340 1107 aa25.4■■□□□ 1.66
LMNA-221ENST00000506981 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
LMNA-221ENST00000506981 ADRA2BP18089 450 aa25.39■■□□□ 1.66
LMNA-221ENST00000506981 TRAPPC3LQ5T215 181 aa25.39■■□□□ 1.66
LMNA-221ENST00000506981 THUMPD2Q9BTF0 503 aaKnown RBP25.39■■□□□ 1.66
LMNA-221ENST00000506981 TEX13AQ9BXU3 409 aaPredicted RBP25.39■■□□□ 1.66
LMNA-221ENST00000506981 CCDC87Q9NVE4 849 aa25.39■■□□□ 1.66
LMNA-221ENST00000506981 STARD3NLO95772 234 aa25.38■■□□□ 1.65
LMNA-221ENST00000506981 AMIGO3Q86WK7 504 aa25.38■■□□□ 1.65
LMNA-221ENST00000506981 KCNQ3O43525 872 aa25.37■■□□□ 1.65
LMNA-221ENST00000506981 CYP19A1P11511 503 aaPredicted RBP25.37■■□□□ 1.65
LMNA-221ENST00000506981 PTGER2P43116 358 aa25.37■■□□□ 1.65
LMNA-221ENST00000506981 SMIM5Q71RC9 77 aa25.37■■□□□ 1.65
LMNA-221ENST00000506981 MSL1Q68DK7 614 aa25.35■■□□□ 1.65
LMNA-221ENST00000506981 RFC4P35249 363 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms