RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 TRIM37O94972 964 aa16.63■□□□□ 0.25
CDK7-204ENST00000506563 PIGBQ92521 554 aa16.63■□□□□ 0.25
CDK7-204ENST00000506563 ZBED9Q6R2W3 1325 aa16.63■□□□□ 0.25
CDK7-204ENST00000506563 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
CDK7-204ENST00000506563 MRC1P22897 1456 aa16.62■□□□□ 0.25
CDK7-204ENST00000506563 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
CDK7-204ENST00000506563 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
CDK7-204ENST00000506563 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
CDK7-204ENST00000506563 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
CDK7-204ENST00000506563 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
CDK7-204ENST00000506563 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
CDK7-204ENST00000506563 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
CDK7-204ENST00000506563 GOLGA2Q08379 1002 aa16.61■□□□□ 0.25
CDK7-204ENST00000506563 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
CDK7-204ENST00000506563 GNAI1P63096 354 aa16.6■□□□□ 0.25
CDK7-204ENST00000506563 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
CDK7-204ENST00000506563 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
CDK7-204ENST00000506563 BCL9O00512 1426 aa16.6■□□□□ 0.25
CDK7-204ENST00000506563 BTAF1O14981 1849 aa16.59■□□□□ 0.25
CDK7-204ENST00000506563 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
CDK7-204ENST00000506563 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
CDK7-204ENST00000506563 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
CDK7-204ENST00000506563 KCNQ3O43525 872 aa16.58■□□□□ 0.24
CDK7-204ENST00000506563 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
CDK7-204ENST00000506563 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
CDK7-204ENST00000506563 BCL11BQ9C0K0 894 aaPredicted RBP16.58■□□□□ 0.24
CDK7-204ENST00000506563 MBIPQ9NS73 344 aa16.58■□□□□ 0.24
CDK7-204ENST00000506563 IL16Q14005 1332 aa16.58■□□□□ 0.24
CDK7-204ENST00000506563 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
CDK7-204ENST00000506563 MYH16Q9H6N6 1097 aa16.57■□□□□ 0.24
CDK7-204ENST00000506563 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 CHL1O00533 1208 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 ADRA2BP18089 450 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
CDK7-204ENST00000506563 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
CDK7-204ENST00000506563 E9PSI1 815 aa16.55■□□□□ 0.24
CDK7-204ENST00000506563 APBA3O96018 575 aa16.55■□□□□ 0.24
CDK7-204ENST00000506563 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
CDK7-204ENST00000506563 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
CDK7-204ENST00000506563 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
CDK7-204ENST00000506563 TNS1Q9HBL0 1735 aaKnown RBP16.54■□□□□ 0.24
CDK7-204ENST00000506563 MSH5O43196 834 aa16.54■□□□□ 0.24
CDK7-204ENST00000506563 SF3B2Q13435 895 aaKnown RBP16.54■□□□□ 0.24
CDK7-204ENST00000506563 KRT24Q2M2I5 525 aa16.53■□□□□ 0.24
CDK7-204ENST00000506563 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
CDK7-204ENST00000506563 EP400Q96L91 3159 aa16.52■□□□□ 0.24
CDK7-204ENST00000506563 ELL2O00472 640 aaPredicted RBP16.52■□□□□ 0.24
CDK7-204ENST00000506563 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
CDK7-204ENST00000506563 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
CDK7-204ENST00000506563 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
CDK7-204ENST00000506563 KCNQ4P56696 695 aa16.51■□□□□ 0.23
CDK7-204ENST00000506563 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
CDK7-204ENST00000506563 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
CDK7-204ENST00000506563 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
CDK7-204ENST00000506563 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
CDK7-204ENST00000506563 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
CDK7-204ENST00000506563 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
CDK7-204ENST00000506563 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
CDK7-204ENST00000506563 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
CDK7-204ENST00000506563 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
CDK7-204ENST00000506563 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
CDK7-204ENST00000506563 SIK1P57059 783 aa16.48■□□□□ 0.23
CDK7-204ENST00000506563 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
CDK7-204ENST00000506563 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
CDK7-204ENST00000506563 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
CDK7-204ENST00000506563 C5P01031 1676 aa16.48■□□□□ 0.23
CDK7-204ENST00000506563 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
CDK7-204ENST00000506563 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
CDK7-204ENST00000506563 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
CDK7-204ENST00000506563 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
CDK7-204ENST00000506563 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
CDK7-204ENST00000506563 LY75O60449 1722 aa16.46■□□□□ 0.23
CDK7-204ENST00000506563 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
CDK7-204ENST00000506563 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
CDK7-204ENST00000506563 BAG6P46379 1132 aa16.46■□□□□ 0.23
CDK7-204ENST00000506563 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
CDK7-204ENST00000506563 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
CDK7-204ENST00000506563 TJP1Q07157 1748 aa16.45■□□□□ 0.22
CDK7-204ENST00000506563 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
CDK7-204ENST00000506563 EZH2Q15910 746 aaKnown RBP16.45■□□□□ 0.22
CDK7-204ENST00000506563 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
CDK7-204ENST00000506563 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDK7-204ENST00000506563 ITPK1Q13572 414 aa16.44■□□□□ 0.22
CDK7-204ENST00000506563 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
CDK7-204ENST00000506563 PLSCR1O15162 318 aa16.43■□□□□ 0.22
CDK7-204ENST00000506563 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
CDK7-204ENST00000506563 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
CDK7-204ENST00000506563 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
CDK7-204ENST00000506563 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
CDK7-204ENST00000506563 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
CDK7-204ENST00000506563 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
CDK7-204ENST00000506563 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
CDK7-204ENST00000506563 VAMP4O75379 141 aa16.41■□□□□ 0.22
CDK7-204ENST00000506563 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
CDK7-204ENST00000506563 PROM2Q8N271 834 aa16.41■□□□□ 0.22
CDK7-204ENST00000506563 CAMKK2Q96RR4 588 aa16.41■□□□□ 0.22
CDK7-204ENST00000506563 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms