RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 ABCC11Q96J66 1382 aa8.97□□□□□ -0.97
CSNK1A1-204ENST00000504676 NEFMP07197 916 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 MTHFSP49914 203 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 NLRP6P59044 892 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 GORABQ5T7V8 394 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 TMUB1Q9BVT8 246 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 GLI2P10070 1586 aa8.96□□□□□ -0.97
CSNK1A1-204ENST00000504676 GGT6Q6P531 493 aa8.96□□□□□ -0.98
CSNK1A1-204ENST00000504676 GPATCH3Q96I76 525 aa8.96□□□□□ -0.98
CSNK1A1-204ENST00000504676 RWDD1Q9H446 243 aaPredicted RBP8.96□□□□□ -0.98
CSNK1A1-204ENST00000504676 VAMP1P23763 118 aa8.95□□□□□ -0.98
CSNK1A1-204ENST00000504676 HIC1Q14526 733 aa8.95□□□□□ -0.98
CSNK1A1-204ENST00000504676 PKNOX2Q96KN3 472 aa8.95□□□□□ -0.98
CSNK1A1-204ENST00000504676 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
CSNK1A1-204ENST00000504676 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
CSNK1A1-204ENST00000504676 ADGRB2O60241 1585 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 HSP90AB4PQ58FF6 505 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 MAMSTRQ6ZN01 415 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 PRDM10Q9NQV6 1147 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 TERF2IPQ9NYB0 399 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 RECKO95980 971 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 IGHDP01880 384 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 IRX5P78411 483 aaPredicted RBP8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 SETQ01105 290 aaPredicted RBP8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 BECN1Q14457 450 aa8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 ARHGEF28Q8N1W1 1705 aaKnown RBP8.94□□□□□ -0.98
CSNK1A1-204ENST00000504676 MAFGO15525 162 aa8.93□□□□□ -0.98
CSNK1A1-204ENST00000504676 PLCG2P16885 1265 aa8.93□□□□□ -0.98
CSNK1A1-204ENST00000504676 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSNK1A1-204ENST00000504676 DIP2CQ9Y2E4 1556 aa8.93□□□□□ -0.98
CSNK1A1-204ENST00000504676 IDI1Q13907 227 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 ZKSCAN2Q63HK3 967 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 TMEM132EQ6IEE7 984 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 BEGAINQ9BUH8 593 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 EMILIN3Q9NT22 766 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 KLHL42Q9P2K6 505 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 PNPLA6Q8IY17 1366 aa8.92□□□□□ -0.98
CSNK1A1-204ENST00000504676 ATG7O95352 703 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 ANAPC15P60006 121 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 NFKBIBQ15653 356 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 PLEKHF1Q96S99 279 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 CHMP4BQ9H444 224 aaKnown RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 OCEL1Q9H607 264 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 UPF2Q9HAU5 1272 aaKnown RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 U2AF1L5P0DN76 240 aaPredicted RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 RGS3P49796 1198 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 U2AF1Q01081 240 aaKnown RBP eCLIP8.91□□□□□ -0.982e-6■■■■□ 21.7
CSNK1A1-204ENST00000504676 HDAC1Q13547 482 aaPredicted RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 MVPQ14764 893 aaKnown RBP8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 NPAS4Q8IUM7 802 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
CSNK1A1-204ENST00000504676 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 IPO8O15397 1037 aaKnown RBP8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 SSTR3P32745 418 aaPredicted RBP8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 LARGE2Q8N3Y3 721 aa8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 PANK1Q8TE04 598 aa8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 VTI1AQ96AJ9 217 aa8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 PLCD4Q9BRC7 762 aa8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 LAS1LQ9Y4W2 734 aaKnown RBP8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 SIGLEC1Q9BZZ2 1709 aa8.9□□□□□ -0.98
CSNK1A1-204ENST00000504676 VIRMAQ69YN4 1812 aaKnown RBP8.9□□□□□ -0.99
CSNK1A1-204ENST00000504676 USP19O94966 1318 aa8.9□□□□□ -0.99
CSNK1A1-204ENST00000504676 DLC1Q96QB1 1528 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 FCHSD2O94868 740 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 TMPOP42166 694 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 ALDH1L2Q3SY69 923 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 HDGFL2Q7Z4V5 671 aaPredicted RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 NOP9Q86U38 636 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 DZIP1LQ8IYY4 767 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 A0A1W2PP64 1363 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 COL3A1P02461 1466 aaPredicted RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 PTPRMP28827 1452 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 REREQ9P2R6 1566 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 YTHDC2Q9H6S0 1430 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 TMEM131LA2VDJ0 1609 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 RICTORQ6R327 1708 aa8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 MAP4K4O95819 1239 aaPredicted RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 FRAT1Q92837 279 aaPredicted RBP8.89□□□□□ -0.99
CSNK1A1-204ENST00000504676 ANKRD26Q9UPS8 1709 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 CDC42BPGQ6DT37 1551 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 FYB1O15117 783 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 PHLDB3Q6NSJ2 640 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 SKAP1Q86WV1 359 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 DNAJC2Q99543 621 aaKnown RBP8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 PCDH10Q9P2E7 1040 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
CSNK1A1-204ENST00000504676 AGLP35573 1532 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms