RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ISY1Q9ULR0 285 aaKnown RBP7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 AMOTL2Q9Y2J4 779 aa7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 PIK3C2GO75747 1445 aa7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 YTHDC2Q9H6S0 1430 aaKnown RBP7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 ASXL1Q8IXJ9 1541 aa7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 BAG4O95429 457 aaKnown RBP7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 GTF2F1P35269 517 aaKnown RBP eCLIP7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 COG3Q96JB2 828 aa7.04□□□□□ -1.28
SOX2-OT-218ENST00000498731 DIAPH1O60610 1272 aaKnown RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 OS9Q13438 667 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 ANKRD7Q92527 254 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 KIF3AQ9Y496 699 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 TRIM66O15016 1216 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 MARCH6O60337 910 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 MKRN4PQ13434 485 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 TERF2Q15554 542 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 TOMM22Q9NS69 142 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 MROH2AA6NES4 1674 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 DEPDC5O75140 1603 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 NUTM2BA6NNL0 878 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 NUTM2EB1AL46 878 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 HSPA1LP34931 641 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 SLC20A2Q08357 652 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 NCBP1Q09161 790 aaKnown RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 NOLC1Q14978 699 aaKnown RBP eCLIP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 NUTM2AQ8IVF1 878 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 PROM2Q8N271 834 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 TSR2Q969E8 191 aaKnown RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 RUNDC1Q96C34 613 aa7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 KIAA1522Q9P206 1035 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-218ENST00000498731 VWDEQ8N2E2 1590 aa7.02□□□□□ -1.28
SOX2-OT-218ENST00000498731 A0A1W2PP64 1363 aa7.02□□□□□ -1.28
SOX2-OT-218ENST00000498731 METP08581 1390 aa7.02□□□□□ -1.28
SOX2-OT-218ENST00000498731 MYOM2P54296 1465 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 DNAJC21Q5F1R6 531 aaKnown RBP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 LMBRD1Q9NUN5 540 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 CTNNA3Q9UI47 895 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 SEMA3EO15041 775 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 HNRNPH2P55795 449 aaKnown RBP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 HSCBQ8IWL3 235 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 TIGD1Q96MW7 591 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZNF219Q9P2Y4 722 aaPredicted RBP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 CCDC61Q9Y6R9 512 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZNF445P59923 1031 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 POM121Q96HA1 1249 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 THUMPD2Q9BTF0 503 aaKnown RBP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 PYCARDQ9ULZ3 195 aa7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 V9GYY5 206 aaPredicted RBP7.02□□□□□ -1.29
SOX2-OT-218ENST00000498731 BLMP54132 1417 aaPredicted RBP7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 PATL2C9JE40 543 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 FOSBP53539 338 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 NOL8Q76FK4 1167 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 CADPS2Q86UW7 1296 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 ATAD2Q6PL18 1390 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 C3P01024 1663 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 KCNA6P17658 529 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 PRKAR2BP31323 418 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 NOP2P46087 812 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 GRIPAP1Q4V328 841 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 UPF2Q9HAU5 1272 aaKnown RBP7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZNF446Q9NWS9 450 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 RSPH14Q9UHP6 348 aa7.01□□□□□ -1.29
SOX2-OT-218ENST00000498731 PRPF40AO75400 957 aaKnown RBP7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZMYND10O75800 440 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 APPP05067 770 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 SMC5Q8IY18 1101 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ARIH1Q9Y4X5 557 aaPredicted RBP7□□□□□ -1.29
SOX2-OT-218ENST00000498731 LMTK2Q8IWU2 1503 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 SYNMO15061 1565 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ANKRD36BQ8N2N9 1353 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZNF521Q96K83 1311 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ATF3P18847 181 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 HMGN5P82970 282 aaKnown RBP7□□□□□ -1.29
SOX2-OT-218ENST00000498731 TAF3Q5VWG9 929 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 DDX17Q92841 729 aaKnown RBP7□□□□□ -1.29
SOX2-OT-218ENST00000498731 AP5Z1O43299 807 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 HSP90AB1P08238 724 aaKnown RBP7□□□□□ -1.29
SOX2-OT-218ENST00000498731 TNNT1P13805 278 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 AMPHP49418 695 aa7□□□□□ -1.29
SOX2-OT-218ENST00000498731 ARHGAP31Q2M1Z3 1444 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 IRF6O14896 467 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 NLRP6P59044 892 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 SLFN5Q08AF3 891 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 GBP4Q96PP9 640 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms