RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 MCM3P25205 808 aa17.69■□□□□ 0.42
C4A-259ENST00000498271 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
C4A-259ENST00000498271 IGHDP01880 384 aa17.69■□□□□ 0.42
C4A-259ENST00000498271 UPF3BQ9BZI7 483 aaKnown RBP17.69■□□□□ 0.42
C4A-259ENST00000498271 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
C4A-259ENST00000498271 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
C4A-259ENST00000498271 CCDC102AQ96A19 550 aa17.68■□□□□ 0.42
C4A-259ENST00000498271 ANKRD36BQ8N2N9 1353 aa17.68■□□□□ 0.42
C4A-259ENST00000498271 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
C4A-259ENST00000498271 TEX14Q8IWB6 1497 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 SHTN1A0MZ66 631 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 EPS15P42566 896 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 TXLNAP40222 546 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 ME1P48163 572 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 PPP4R3BQ5MIZ7 849 aa17.67■□□□□ 0.42
C4A-259ENST00000498271 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
C4A-259ENST00000498271 SRGAP3O43295 1099 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 CCDC181Q5TID7 509 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 MPNDQ8N594 471 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
C4A-259ENST00000498271 CT47A1Q5JQC4 288 aaPredicted RBP17.66■□□□□ 0.42
C4A-259ENST00000498271 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
C4A-259ENST00000498271 TIGD1Q96MW7 591 aa17.66■□□□□ 0.42
C4A-259ENST00000498271 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
C4A-259ENST00000498271 ADGRL2O95490 1459 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
C4A-259ENST00000498271 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 POTEB2H3BUK9 544 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 IL1RAPL2Q9NP60 686 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 PAXBP1Q9Y5B6 917 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 HS1BP3Q53T59 392 aa17.65■□□□□ 0.42
C4A-259ENST00000498271 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.42
C4A-259ENST00000498271 BMS1Q14692 1282 aaKnown RBP17.64■□□□□ 0.41
C4A-259ENST00000498271 DDX11Q96FC9 970 aa17.64■□□□□ 0.41
C4A-259ENST00000498271 A2MP01023 1474 aa17.64■□□□□ 0.41
C4A-259ENST00000498271 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
C4A-259ENST00000498271 HSP90AB2PQ58FF8 381 aa17.64■□□□□ 0.41
C4A-259ENST00000498271 KRT32Q14532 448 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 SCAND2PQ9GZW5 306 aaPredicted RBP17.63■□□□□ 0.41
C4A-259ENST00000498271 IL16Q14005 1332 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 TNNT1P13805 278 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 CRACR2AQ9BSW2 395 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 TOM1O60784 492 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 CCDC148Q8NFR7 591 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 SIL1Q9H173 461 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
C4A-259ENST00000498271 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
C4A-259ENST00000498271 STIM1Q13586 685 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
C4A-259ENST00000498271 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
C4A-259ENST00000498271 ANO10Q9NW15 660 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 CTAGE5O15320 804 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 CAVIN2O95810 425 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 GSDMDP57764 484 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
C4A-259ENST00000498271 PRM3Q9NNZ6 103 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 WDR7Q9Y4E6 1490 aa17.62■□□□□ 0.41
C4A-259ENST00000498271 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
C4A-259ENST00000498271 BLOC1S2Q6QNY1 142 aa17.61■□□□□ 0.41
C4A-259ENST00000498271 MICALCLQ6ZW33 695 aa17.61■□□□□ 0.41
C4A-259ENST00000498271 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
C4A-259ENST00000498271 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
C4A-259ENST00000498271 FYB1O15117 783 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 MYL6BP14649 208 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
C4A-259ENST00000498271 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 BRPF1P55201 1214 aaPredicted RBP17.6■□□□□ 0.41
C4A-259ENST00000498271 ARHGAP29Q52LW3 1261 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 PIK3C2GO75747 1445 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
C4A-259ENST00000498271 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
C4A-259ENST00000498271 AACSQ86V21 672 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
C4A-259ENST00000498271 PLCD4Q9BRC7 762 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.41
C4A-259ENST00000498271 SSFA2P28290 1259 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 CABP4P57796 275 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
C4A-259ENST00000498271 MX1P20591 662 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
C4A-259ENST00000498271 SKIDA1Q1XH10 827 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms